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F4C8R0 (F4C8R0_SPHS2) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Sph21_4587 EMBL ADZ81102.1
OrganismSphingobacterium sp. (strain 21) [Complete proteome] [HAMAP] EMBL ADZ81102.1
Taxonomic identifier743722 [NCBI]
Taxonomic lineageBacteriaBacteroidetesSphingobacteriiaSphingobacterialesSphingobacteriaceaeSphingobacterium

Protein attributes

Sequence length381 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F4C8R0 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: C02932AB5AAB5BB5

FASTA38142,706
        10         20         30         40         50         60 
MRENKFKYLY LLINFLIVGY GCVAGQHTSE RMAMDSSIVF TPNERYASTR IPALVMSKKG 

        70         80         90        100        110        120 
TLLAFCEGRI GSASDWSEMD LLMRRSKDGG RTWEAPIVIA PKKSGPTSNP TPIVDSKGTI 

       130        140        150        160        170        180 
HLLYQRDYAR AYYTFSTDDG ETWSPAMDIT ATFDAFKPAY DWKVLAPGPG HSIQLKNGRL 

       190        200        210        220        230        240 
LVPVWLSDPA KTVPHRSHAP SCIATIYSDD LGKTWKRGEI IAKNSAEFKN PSETMAIQLK 

       250        260        270        280        290        300 
DGRVMVNIRN TSEKHLRGVS YSKDGISGWS KPVFDEELFD PICMASIIRL SDRKKGILFL 

       310        320        330        340        350        360 
NPDSRDIPKH PRKNLTAKVS YDEGQTWPIS KLIHEGPSGY SDVAVGADGT VYCLFETNSG 

       370        380 
KDWNYNIVLK TFKLDWLTDN K 

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References

[1]"Complete sequence of Sphingobacterium sp. 21."
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Siebers A.K., Allgaier M. expand/collapse author list , Thelen M.P., Hugenholtz P., Woyke T.
Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 21.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002584 Genomic DNA. Translation: ADZ81102.1.
RefSeqYP_004319772.1. NC_015277.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADZ81102; ADZ81102; Sph21_4587.
GeneID10350371.
KEGGshg:Sph21_4587.
PATRIC47243488. VBISphSp165585_4880.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01186.
OMACIATIYS.

Enzyme and pathway databases

BioCycSSP743722:GH04-4643-MONOMER.

Family and domain databases

Gene3D2.120.10.10. 1 hit.
InterProIPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
SUPFAMSSF50939. SSF50939. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF4C8R0_SPHS2
AccessionPrimary (citable) accession number: F4C8R0
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: April 16, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)