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F4C7A7 (F4C7A7_SPHS2) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=5.4.99.16 EMBL ADZ80341.1
Gene names
Ordered Locus Names:Sph21_3806 EMBL ADZ80341.1
OrganismSphingobacterium sp. (strain 21) [Complete proteome] [HAMAP] EMBL ADZ80341.1
Taxonomic identifier743722 [NCBI]
Taxonomic lineageBacteriaBacteroidetesSphingobacteriiaSphingobacterialesSphingobacteriaceaeSphingobacterium

Protein attributes

Sequence length546 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
F4C7A7 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 091BDF08AD90E1BF

FASTA54663,778
        10         20         30         40         50         60 
MKDLCSQHWL KEAVIYSLDV RSFKDADHNG LGDIQGLISK LDYLQYLGIN CIWLVPFYSS 

        70         80         90        100        110        120 
DEKDGGYDVV NYYTVDTRLG TLQDFEVLVK SAAKRNIKII IDLVVNHTSN RHPWFLEAIS 

       130        140        150        160        170        180 
DRGSRFHDFY IWKDEKPEND KEDLVFKTVE ESNWEYNHQV NRYYYHTFYH FQPDLNVSNP 

       190        200        210        220        230        240 
AVQEEILRIL NFWMQFGIFG FRIDAVPHIL KNKGDERFEG NPYDVLDRWK EAVLKINKDA 

       250        260        270        280        290        300 
ILIGEADVEP EDYPRFFNKG KKLDGLFNFF LNNYLFLALA EHCAKPLINA FKRLPFSNGH 

       310        320        330        340        350        360 
GQYLNFLRNH DELDLERLTN DERARVMEVF APCPFMRIYD RGIRRRLPPM LNNNRMHICL 

       370        380        390        400        410        420 
SMNLLLTLPG SPVIRYGEEI GMGDDLDLQE RQSVRTAMQW DDTINGGFSS VSPPELKWTV 

       430        440        450        460        470        480 
IDGGVYGYQN INVSKEMDDE FSILCQTKKI IASRKEYKLA FCSSFQILKN DHPQIFIYRY 

       490        500        510        520        530        540 
DLNDYGILII NNFSYTNADV EIDLTKEKPV LTCVLGSPLS MKESAGKINL ILSPYSYLWY 


KLSKLE 

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References

[1]"Complete sequence of Sphingobacterium sp. 21."
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Siebers A.K., Allgaier M. expand/collapse author list , Thelen M.P., Hugenholtz P., Woyke T.
Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 21.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002584 Genomic DNA. Translation: ADZ80341.1.
RefSeqYP_004319011.1. NC_015277.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADZ80341; ADZ80341; Sph21_3806.
GeneID10349586.
KEGGshg:Sph21_3806.
PATRIC47241841. VBISphSp165585_4064.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK05343.
OMAAILMGEV.

Enzyme and pathway databases

BioCycSSP743722:GH04-3859-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameF4C7A7_SPHS2
AccessionPrimary (citable) accession number: F4C7A7
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: May 14, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)