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Protein

Adenylosuccinate lyase

Gene

Sph21_3621

Organism
Sphingobacterium sp. (strain 21)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate = fumarate + 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide.UniRule annotation
N(6)-(1,2-dicarboxyethyl)AMP = fumarate + AMP.UniRule annotation

Pathwayi

GO - Molecular functioni

  1. (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity Source: UniProtKB-EC
  2. N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity Source: UniProtKB-EC

GO - Biological processi

  1. 'de novo' AMP biosynthetic process Source: UniProtKB-UniPathway
  2. 'de novo' IMP biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationImported

Keywords - Biological processi

Purine biosynthesisUniRule annotation

Enzyme and pathway databases

BioCyciSSP743722:GH04-3672-MONOMER.
UniPathwayiUPA00074; UER00132.
UPA00075; UER00336.

Names & Taxonomyi

Protein namesi
Recommended name:
Adenylosuccinate lyaseUniRule annotation (EC:4.3.2.2UniRule annotation)
Short name:
ASLUniRule annotation
Alternative name(s):
AdenylosuccinaseUniRule annotation
Gene namesi
Ordered Locus Names:Sph21_3621Imported
OrganismiSphingobacterium sp. (strain 21)Imported
Taxonomic identifieri743722 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesSphingobacteriiaSphingobacterialesSphingobacteriaceaeSphingobacterium
ProteomesiUP000007808: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF4C783.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.UniRule annotation

Phylogenomic databases

KOiK01756.
OMAiDKNWEVL.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
IPR004769. Pur_lyase.
IPR013539. PurB_C.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF08328. ASL_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00928. purB. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F4C783-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSLSPLTAVS PIDGRYHSAT KDLASFFSEA ALIKYRVFVE IEYFIALAET
60 70 80 90 100
GISQLSALPN KAALRAIYED FSENDAQRIK DLEKTTNHDV KAVEYFIKEK
110 120 130 140 150
FEAIGLTDSK EFIHFGLTSQ DINNTAIPYS WKEALNKVYY PGIHVLISEI
160 170 180 190 200
DAMAKQWKAI PMLAKTHGQP ASPTRLGKEL AVFVERLEGQ LNQLKAIPFS
210 220 230 240 250
AKFGGATGNF NAHHIAYPDI DWVAFGNHLV NDILGLHRSQ KTTQIEHYDN
260 270 280 290 300
FAAHCDALKR VNNILIDLCR DIWTYISMDY FKQQIIAGQI GSSAMPHKVN
310 320 330 340 350
PIDFENAEGN LGLANALFEH LAAKLPISRL QRDLTDSTVL RNIGVPFGHT
360 370 380 390 400
LIAFKSIMRG LKKLILNEDA LRADLEKNWA VVAEAIQTIL RREGYPKPYE
410 420 430 440
ALKDLTRTNE AINQESIAAF INNLNIADPL KEELKAITPW NYTGV
Length:445
Mass (Da):49,897
Last modified:June 28, 2011 - v1
Checksum:i3DCEEBFB8FC46384
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002584 Genomic DNA. Translation: ADZ80158.1.
RefSeqiWP_013666876.1. NC_015277.1.
YP_004318828.1. NC_015277.1.

Genome annotation databases

EnsemblBacteriaiADZ80158; ADZ80158; Sph21_3621.
GeneIDi10349399.
KEGGishg:Sph21_3621.
PATRICi47241450. VBISphSp165585_3872.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002584 Genomic DNA. Translation: ADZ80158.1.
RefSeqiWP_013666876.1. NC_015277.1.
YP_004318828.1. NC_015277.1.

3D structure databases

ProteinModelPortaliF4C783.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADZ80158; ADZ80158; Sph21_3621.
GeneIDi10349399.
KEGGishg:Sph21_3621.
PATRICi47241450. VBISphSp165585_3872.

Phylogenomic databases

KOiK01756.
OMAiDKNWEVL.

Enzyme and pathway databases

UniPathwayiUPA00074; UER00132.
UPA00075; UER00336.
BioCyciSSP743722:GH04-3672-MONOMER.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
IPR004769. Pur_lyase.
IPR013539. PurB_C.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF08328. ASL_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00928. purB. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Sphingobacterium sp. 21."
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Siebers A.K., Allgaier M.
    , Thelen M.P., Hugenholtz P., Woyke T.
    Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 21Imported.

Entry informationi

Entry nameiF4C783_SPHS2
AccessioniPrimary (citable) accession number: F4C783
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: February 4, 2015
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.