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F4C4T2 (F4C4T2_SPHS2) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Sph21_5174 EMBL ADZ81663.1
OrganismSphingobacterium sp. (strain 21) [Complete proteome] [HAMAP] EMBL ADZ81663.1
Taxonomic identifier743722 [NCBI]
Taxonomic lineageBacteriaBacteroidetesSphingobacteriiaSphingobacterialesSphingobacteriaceaeSphingobacterium

Protein attributes

Sequence length553 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ADZ81663.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F4C4T2 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: A7890386FFBB8525

FASTA55362,048
        10         20         30         40         50         60 
MSIYKISLLI YVFGIFFHLS MAKPVIQIEQ TQFQVPILIG KPVNPVLRIK ITIEGTKPHQ 

        70         80         90        100        110        120 
LKALSLQTQG TTAIQDLNTV EVYYTGKDTL LNKMSTALKL FGKKANPKAN ITLEGDTELN 

       130        140        150        160        170        180 
PGIHYLWVTC RLTDQANLLH KIAFQLEDVH FNESTDVRIT DRPIMEQRIG IAIHQRMENG 

       190        200        210        220        230        240 
IHTARIPGLA VTPKGTLLAI FDARRESSRD LQGDIDIGLR RSTNGGQTWE PLTIAMDMGK 

       250        260        270        280        290        300 
WGGLPEKFNG VSDACILVDK NSNTIYIAAL WMHGIIDKDG QWVKGLKENS DHWNHQWKNK 

       310        320        330        340        350        360 
GSQPGFGIKQ TSQFMLVKST DDGKTWSKPL NITKMCKKKD WWLFAPAPGN GIVLNDGTLV 

       370        380        390        400        410        420 
FPTQGRDSLG TPFSTITYSK DSGKTWQTAK RALNEVATTE CAVVQLADRS LMLNMRANKN 

       430        440        450        460        470        480 
KGEIGSNNGR AVCVTRDMGK TWTQHPSAFH ALPEPVCMAS LYKHSFMDAG KQRHLLLFSN 

       490        500        510        520        530        540 
PNSKTDRDHL TIKVSTNDGQ TWPQKYWVLL DEWKGRGYSC IAAVDEQHIG ILYESSQADM 

       550 
VFQKIAVSEW PEK 

« Hide

References

[1]"Complete sequence of Sphingobacterium sp. 21."
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Siebers A.K., Allgaier M. expand/collapse author list , Thelen M.P., Hugenholtz P., Woyke T.
Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 21.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002584 Genomic DNA. Translation: ADZ81663.1.
RefSeqYP_004320333.1. NC_015277.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADZ81663; ADZ81663; Sph21_5174.
GeneID10350963.
KEGGshg:Sph21_5174.
PATRIC47244711. VBISphSp165585_5483.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01186.
OMAWGGLPEK.

Enzyme and pathway databases

BioCycSSP743722:GH04-5235-MONOMER.

Family and domain databases

Gene3D2.120.10.10. 1 hit.
InterProIPR026856. Sialidase_fam.
IPR029456. Sialidase_N.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
PfamPF14873. BNR_assoc_N. 1 hit.
[Graphical view]
SUPFAMSSF50939. SSF50939. 2 hits.
ProtoNetSearch...

Entry information

Entry nameF4C4T2_SPHS2
AccessionPrimary (citable) accession number: F4C4T2
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: June 11, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)