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Protein
Submitted name:

Glycosyl hydrolase BNR repeat-containing protein

Gene

Sph21_5174

Organism
Sphingobacterium sp. (strain 21)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciSSP743722:GH04-5235-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycosyl hydrolase BNR repeat-containing proteinImported
Gene namesi
Ordered Locus Names:Sph21_5174Imported
OrganismiSphingobacterium sp. (strain 21)Imported
Taxonomic identifieri743722 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesSphingobacteriiaSphingobacterialesSphingobacteriaceaeSphingobacterium
ProteomesiUP000007808 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi743722.Sph21_5174.

Family & Domainsi

Phylogenomic databases

KOiK01186.
OMAiWGGLPEK.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR029456. Sialidase_N.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF14873. BNR_assoc_N. 1 hit.
[Graphical view]
SUPFAMiSSF50939. SSF50939. 2 hits.

Sequencei

Sequence statusi: Complete.

F4C4T2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSIYKISLLI YVFGIFFHLS MAKPVIQIEQ TQFQVPILIG KPVNPVLRIK
60 70 80 90 100
ITIEGTKPHQ LKALSLQTQG TTAIQDLNTV EVYYTGKDTL LNKMSTALKL
110 120 130 140 150
FGKKANPKAN ITLEGDTELN PGIHYLWVTC RLTDQANLLH KIAFQLEDVH
160 170 180 190 200
FNESTDVRIT DRPIMEQRIG IAIHQRMENG IHTARIPGLA VTPKGTLLAI
210 220 230 240 250
FDARRESSRD LQGDIDIGLR RSTNGGQTWE PLTIAMDMGK WGGLPEKFNG
260 270 280 290 300
VSDACILVDK NSNTIYIAAL WMHGIIDKDG QWVKGLKENS DHWNHQWKNK
310 320 330 340 350
GSQPGFGIKQ TSQFMLVKST DDGKTWSKPL NITKMCKKKD WWLFAPAPGN
360 370 380 390 400
GIVLNDGTLV FPTQGRDSLG TPFSTITYSK DSGKTWQTAK RALNEVATTE
410 420 430 440 450
CAVVQLADRS LMLNMRANKN KGEIGSNNGR AVCVTRDMGK TWTQHPSAFH
460 470 480 490 500
ALPEPVCMAS LYKHSFMDAG KQRHLLLFSN PNSKTDRDHL TIKVSTNDGQ
510 520 530 540 550
TWPQKYWVLL DEWKGRGYSC IAAVDEQHIG ILYESSQADM VFQKIAVSEW

PEK
Length:553
Mass (Da):62,048
Last modified:June 28, 2011 - v1
Checksum:iA7890386FFBB8525
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002584 Genomic DNA. Translation: ADZ81663.1.
RefSeqiWP_013668360.1. NC_015277.1.

Genome annotation databases

EnsemblBacteriaiADZ81663; ADZ81663; Sph21_5174.
KEGGishg:Sph21_5174.
PATRICi47244711. VBISphSp165585_5483.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002584 Genomic DNA. Translation: ADZ81663.1.
RefSeqiWP_013668360.1. NC_015277.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi743722.Sph21_5174.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADZ81663; ADZ81663; Sph21_5174.
KEGGishg:Sph21_5174.
PATRICi47244711. VBISphSp165585_5483.

Phylogenomic databases

KOiK01186.
OMAiWGGLPEK.

Enzyme and pathway databases

BioCyciSSP743722:GH04-5235-MONOMER.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR029456. Sialidase_N.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF14873. BNR_assoc_N. 1 hit.
[Graphical view]
SUPFAMiSSF50939. SSF50939. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Sphingobacterium sp. 21."
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Siebers A.K., Allgaier M.
    , Thelen M.P., Hugenholtz P., Woyke T.
    Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 21Imported.

Entry informationi

Entry nameiF4C4T2_SPHS2
AccessioniPrimary (citable) accession number: F4C4T2
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: July 22, 2015
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.