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Protein

Superoxide dismutase

Gene

sodA

Organism
Carnobacterium sp. (strain 17-4)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Enzyme and pathway databases

BioCyciCSP208596:GHHT-1331-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodAImported
Ordered Locus Names:CAR_c13310Imported
OrganismiCarnobacterium sp. (strain 17-4)Imported
Taxonomic identifieri208596 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesCarnobacteriaceaeCarnobacterium
ProteomesiUP000008304 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF4BRV2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04564.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F4BRV2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEELIMTYEL PKLPYGYDAL EPHIDQATME FHHDKHHATY VEKTNAALEK
60 70 80 90 100
YPELAKKSIE ELVADLNSVP EEIRTAIRNN GGGHANHSFF WEILSPNGGG
110 120 130 140 150
EPTGTLKEDI EATFGSFDKF KEAIETAGAG QFGSGWAWLV LNNGKLEVTS
160 170 180 190 200
TANQDSPLTD GKTPLFGVDV WEHAYYLNYQ NKRPAYLKAV WNVVNWNEVA

KRYEAAK
Length:207
Mass (Da):23,276
Last modified:June 27, 2011 - v1
Checksum:i9B01BC27D927AD9F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002563 Genomic DNA. Translation: AEB30022.1.
RefSeqiWP_013710964.1. NC_015391.1.
YP_004375038.1. NC_015391.1.

Genome annotation databases

EnsemblBacteriaiAEB30022; AEB30022; CAR_c13310.
KEGGicrn:CAR_c13310.
PATRICi54450192. VBICarSp108130_1337.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002563 Genomic DNA. Translation: AEB30022.1.
RefSeqiWP_013710964.1. NC_015391.1.
YP_004375038.1. NC_015391.1.

3D structure databases

ProteinModelPortaliF4BRV2.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEB30022; AEB30022; CAR_c13310.
KEGGicrn:CAR_c13310.
PATRICi54450192. VBICarSp108130_1337.

Phylogenomic databases

KOiK04564.

Enzyme and pathway databases

BioCyciCSP208596:GHHT-1331-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Carnobacterium sp. 17-4."
    Voget S., Klippel B., Daniel R., Antranikian G.
    J. Bacteriol. 193:3403-3404(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 17-4Imported.

Entry informationi

Entry nameiF4BRV2_CARS1
AccessioniPrimary (citable) accession number: F4BRV2
Entry historyi
Integrated into UniProtKB/TrEMBL: June 27, 2011
Last sequence update: June 27, 2011
Last modified: March 31, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.