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Protein

50S ribosomal protein L1

Gene

rplA

Organism
Carnobacterium sp. (strain 17-4)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.UniRule annotation
Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRepressorUniRule annotation, Ribonucleoprotein, Ribosomal proteinUniRule annotationImported, RNA-binding, rRNA-bindingUniRule annotation, tRNA-bindingUniRule annotation
Biological processTranslation regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L1UniRule annotation
Gene namesi
Name:rplAUniRule annotationImported
Ordered Locus Names:CAR_c24580Imported
OrganismiCarnobacterium sp. (strain 17-4)Imported
Taxonomic identifieri208596 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesCarnobacteriaceaeCarnobacterium
Proteomesi
  • UP000008304 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi208596.CAR_c24580

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL1 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105C64 Bacteria
COG0081 LUCA
KOiK02863
OMAiGWTDVDV
OrthoDBiPOG091H023J

Family and domain databases

CDDicd00403 Ribosomal_L1, 1 hit
Gene3Di3.40.50.7901 hit
HAMAPiMF_01318_B Ribosomal_L1_B, 1 hit
InterProiView protein in InterPro
IPR005878 Ribosom_L1_bac-type
IPR002143 Ribosomal_L1
IPR023674 Ribosomal_L1-like
IPR028364 Ribosomal_L1/biogenesis
IPR016095 Ribosomal_L1_3-a/b-sand
IPR023673 Ribosomal_L1_CS
PfamiView protein in Pfam
PF00687 Ribosomal_L1, 1 hit
PIRSFiPIRSF002155 Ribosomal_L1, 1 hit
SUPFAMiSSF56808 SSF56808, 1 hit
TIGRFAMsiTIGR01169 rplA_bact, 1 hit
PROSITEiView protein in PROSITE
PS01199 RIBOSOMAL_L1, 1 hit

Sequencei

Sequence statusi: Complete.

F4BRF2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGGKTVITTI KEEKIMAKKS KQYLAAAEKV DVLKAYSLEE AVALIKDVDY
60 70 80 90 100
AKFDATVEVA YRLGVDPKKA DQQIRGAVVL PNGTGKTQKV LVFAKGEKAK
110 120 130 140 150
EAEAAGADYV GEAELVQKIN GGWFDFDVVV ATPDMMAEVG RLGRVLGPKG
160 170 180 190 200
LMPNPKTGTV TMDVTKAINE IKAGKVTYRV DKAGNVHAPI GKVSFDNAKL
210 220 230 240
VENFRTINDT MLRVKPSTAK GEYIKNITVT TTFGPGVKVD AGSF
Length:244
Mass (Da):26,184
Last modified:June 28, 2011 - v1
Checksum:i11A197ED19169732
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002563 Genomic DNA Translation: AEB31113.1

Genome annotation databases

EnsemblBacteriaiAEB31113; AEB31113; CAR_c24580
KEGGicrn:CAR_c24580

Similar proteinsi

Entry informationi

Entry nameiF4BRF2_CARS1
AccessioniPrimary (citable) accession number: F4BRF2
Entry historyiIntegrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: March 28, 2018
This is version 38 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported