F4BNM8 (F4BNM8_CARS1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Pseudouridine synthase RuleBase RU003886
EC=5.4.99.- RuleBase RU003886

Gene names

Name:	yjbO EMBL AEB29453.1
Ordered Locus Names:	CAR_c07590 EMBL AEB29453.1

Organism

Carnobacterium sp. (strain 17-4) [Complete proteome] [HAMAP] EMBL AEB29453.1

Taxonomic identifier

208596 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Lactobacillales › Carnobacteriaceae › Carnobacterium

Protein attributes

Sequence length	303 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pseudouridine synthase rluA family. RuleBase RU004243

Ontologies

Keywords
Molecular function	Isomerase RuleBase RU003886
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	pseudouridine synthesis Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro pseudouridine synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F4BNM8 [UniParc]. Last modified June 28, 2011. Version 1. Checksum: A117EC46987639ED	FASTA	303	34,643
	10 20 30 40 50 60 MKFSWSYELP TSLQVKSFLK TKGISRSLLA KIKFHGGKIE VNETEVTVRY LLKDKDIVQV 70 80 90 100 110 120 TIPDEAPHET TVPINIPIDI VYEDDHYLVV NKPYGVASVP SQVHPEGTMA NRVKGYYVRQ 130 140 150 160 170 180 NYADQVIHIV TRLDRDTTGL MLFAKHGYAH ALMDAKLRAK EITKKYTALI SGQLDKAEHG 190 200 210 220 230 240 FIDAPIARTT DSIITRRAHE SGKEALTEYW IKGSFPQATL VDIQLHTGRT HQIRVHFTHI 250 260 270 280 290 300 GHPLMGDDLY GGEKNNWITR QALHCRELNF SHPFTNEQIN LELGYPEDIT QWLHQHEQQK VNS

References

[1]	"Complete genome sequence of Carnobacterium sp. 17-4." Voget S., Klippel B., Daniel R., Antranikian G. J. Bacteriol. 193:3403-3404(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 17-4 EMBL AEB29453.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002563 Genomic DNA. Translation: AEB29453.1.
RefSeq	YP_004374469.1. NC_015391.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEB29453; AEB29453; CAR_c07590.
GeneID	10440879.
KEGG	crn:CAR_c07590.
PATRIC	54449037. VBICarSp108130_0765.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K06180.
Enzyme and pathway databases
BioCyc	CSP208596:GHHT-759-MONOMER.
Family and domain databases
InterPro	IPR020103. PsdUridine_synth_cat_dom. IPR006225. PsdUridine_synth_RluC/D. IPR006224. PsdUridine_synth_RluC/D_CS. IPR006145. PsdUridine_synth_RsuA/RluD. [Graphical view]
Pfam	PF00849. PseudoU_synth_2. 1 hit. [Graphical view]
SUPFAM	SSF55120. PsdUridine_synth_cat_dom. 1 hit.
TIGRFAMs	TIGR00005. rluA_subfam. 1 hit.
PROSITE	PS01129. PSI_RLU. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F4BNM8_CARS1

Accession

Primary (citable) accession number: F4BNM8

Entry history

Integrated into UniProtKB/TrEMBL:	June 28, 2011
Last sequence update:	June 28, 2011
Last modified:	April 3, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)