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F4BNE4

- F4BNE4_CARS1

UniProt

F4BNE4 - F4BNE4_CARS1

Protein

Beta-galactosidase

Gene

ganA

Organism
Carnobacterium sp. (strain 17-4)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 23 (01 Oct 2014)
      Sequence version 1 (28 Jun 2011)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei119 – 1191SubstrateUniRule annotation
    Metal bindingi123 – 1231ZincUniRule annotation
    Binding sitei157 – 1571SubstrateUniRule annotation
    Active sitei158 – 1581Proton donorUniRule annotation
    Metal bindingi163 – 1631ZincUniRule annotation
    Metal bindingi165 – 1651ZincUniRule annotation
    Metal bindingi168 – 1681ZincUniRule annotation
    Active sitei322 – 3221NucleophileUniRule annotation
    Binding sitei330 – 3301SubstrateUniRule annotation

    GO - Molecular functioni

    1. beta-galactosidase activity Source: UniProtKB-EC
    2. metal ion binding Source: UniProtKB-KW

    GO - Biological processi

    1. galactose metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseUniRule annotationImported, Hydrolase

    Keywords - Ligandi

    Metal-bindingUniRule annotation, ZincUniRule annotation

    Enzyme and pathway databases

    BioCyciCSP208596:GHHT-1956-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-galactosidaseUniRule annotation (EC:3.2.1.23UniRule annotation)
    Short name:
    Beta-galUniRule annotation
    Gene namesi
    Name:ganAImported
    Ordered Locus Names:CAR_c19560Imported
    OrganismiCarnobacterium sp. (strain 17-4)Imported
    Taxonomic identifieri208596 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesCarnobacteriaceaeCarnobacterium
    ProteomesiUP000008304: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. beta-galactosidase complex Source: InterPro

    Structurei

    3D structure databases

    ProteinModelPortaliF4BNE4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 42 family.UniRule annotation

    Phylogenomic databases

    KOiK12308.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    3.40.50.880. 1 hit.
    InterProiIPR013739. Beta_galactosidase_C.
    IPR013738. Beta_galactosidase_Trimer.
    IPR029062. Class_I_gatase-like.
    IPR003476. Glyco_hydro_42.
    IPR013529. Glyco_hydro_42_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PfamiPF02449. Glyco_hydro_42. 1 hit.
    PF08533. Glyco_hydro_42C. 1 hit.
    PF08532. Glyco_hydro_42M. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001084. B-galactosidase. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    SSF52317. SSF52317. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    F4BNE4-1 [UniParc]FASTAAdd to Basket

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    MNERKKKQVT KANFLLHGGD YNPDQWLDCP DILAEDLSLM KLANTNTYSI    50
    GIFAWSALEP EEDSYTFEWM DKIIEDIHQN GGNIILATPS GARPAWMSEK 100
    YPEVLRVNEN RQKQLQGARH NHCFSSKVYR EKTQKMNRKL AERYGDHPAL 150
    IMWHISNEYG GECHCDLCQE AFREWLKKEY NADLKALNDA WWGPFWSHTF 200
    TSWSQIQSPS PIGENAVHGL NLDWHRFVTD QTIDFYENEI VPMRELTPEI 250
    PITTNFMADT TDLIPFQSLD YSKFAKHVDV ISWDAYPAWH NDWESTAELA 300
    SKVAFIDDLY RSLKQQPFIL MESTPSGVNW HPVNKAKRPG MHLLSSMQML 350
    AHGSDSIMYF QWRKSRGSSE KFHGAVVDHD KSPENRVFKD VSDVGAVLKK 400
    LDNVVGSTRS AEVAFLYDWE SNWALDHAQG FGLETKQYPQ TIQKQYRSFW 450
    EKDIAVDVIT KEQDFSAYRL LVVPMLYLMS EETINQLKSF VSNGGVLVSG 500
    YMTGLVDEHD LAYLGGWPEQ LQEIFGMKPL ETDTLYPKDK NEIQYKGKNY 550
    LLKEYATIIE VEDATVIGTY QEDFYAHTPA ITKHAYGKGE SYYIGGRLEH 600
    SFYEDFYGQL IEELNLKPKL FIQHDKGVSV QTRQTEEEDI TFVMNFSEEE 650
    QKIVLTETVK DSLNDTILSG EVILDPYGFK VLSKKIK 687
    Length:687
    Mass (Da):79,325
    Last modified:June 28, 2011 - v1
    Checksum:iF1541BB224768C0F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002563 Genomic DNA. Translation: AEB30613.1.
    RefSeqiWP_013711555.1. NC_015391.1.
    YP_004375629.1. NC_015391.1.

    Genome annotation databases

    EnsemblBacteriaiAEB30613; AEB30613; CAR_c19560.
    GeneIDi10442076.
    KEGGicrn:CAR_c19560.
    PATRICi54451442. VBICarSp108130_1928.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002563 Genomic DNA. Translation: AEB30613.1 .
    RefSeqi WP_013711555.1. NC_015391.1.
    YP_004375629.1. NC_015391.1.

    3D structure databases

    ProteinModelPortali F4BNE4.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEB30613 ; AEB30613 ; CAR_c19560 .
    GeneIDi 10442076.
    KEGGi crn:CAR_c19560.
    PATRICi 54451442. VBICarSp108130_1928.

    Phylogenomic databases

    KOi K12308.

    Enzyme and pathway databases

    BioCyci CSP208596:GHHT-1956-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    3.40.50.880. 1 hit.
    InterProi IPR013739. Beta_galactosidase_C.
    IPR013738. Beta_galactosidase_Trimer.
    IPR029062. Class_I_gatase-like.
    IPR003476. Glyco_hydro_42.
    IPR013529. Glyco_hydro_42_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    Pfami PF02449. Glyco_hydro_42. 1 hit.
    PF08533. Glyco_hydro_42C. 1 hit.
    PF08532. Glyco_hydro_42M. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001084. B-galactosidase. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    SSF52317. SSF52317. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete gnome sequence of Carnobacterium sp. 17-4."
      Voget S., Klippel B., Daniel R., Antranikian G.
      J. Bacteriol. 193:3403-3404(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 17-4Imported.

    Entry informationi

    Entry nameiF4BNE4_CARS1
    AccessioniPrimary (citable) accession number: F4BNE4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 28, 2011
    Last sequence update: June 28, 2011
    Last modified: October 1, 2014
    This is version 23 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3