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F4BNE4 (F4BNE4_CARS1) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Beta-galactosidase PIRNR PIRNR001084

Short name=Beta-gal PIRNR PIRNR001084
EC=3.2.1.23 PIRNR PIRNR001084
Gene names
Name:ganA EMBL AEB30613.1
Ordered Locus Names:CAR_c19560 EMBL AEB30613.1
OrganismCarnobacterium sp. (strain 17-4) [Complete proteome] [HAMAP] EMBL AEB30613.1
Taxonomic identifier208596 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesCarnobacteriaceaeCarnobacterium

Protein attributes

Sequence length687 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. PIRNR PIRNR001084

Sequence similarities

Belongs to the glycosyl hydrolase 42 family. PIRNR PIRNR001084

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1581Proton donor By similarity PIRSR PIRSR001084-1
Active site3221Nucleophile By similarity PIRSR PIRSR001084-1
Metal binding1231Zinc By similarity PIRSR PIRSR001084-3
Metal binding1631Zinc By similarity PIRSR PIRSR001084-3
Metal binding1651Zinc By similarity PIRSR PIRSR001084-3
Metal binding1681Zinc By similarity PIRSR PIRSR001084-3
Binding site1191Substrate By similarity PIRSR PIRSR001084-2
Binding site1571Substrate By similarity PIRSR PIRSR001084-2
Binding site3301Substrate By similarity PIRSR PIRSR001084-2

Sequences

Sequence LengthMass (Da)Tools
F4BNE4 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: F1541BB224768C0F

FASTA68779,325
        10         20         30         40         50         60 
MNERKKKQVT KANFLLHGGD YNPDQWLDCP DILAEDLSLM KLANTNTYSI GIFAWSALEP 

        70         80         90        100        110        120 
EEDSYTFEWM DKIIEDIHQN GGNIILATPS GARPAWMSEK YPEVLRVNEN RQKQLQGARH 

       130        140        150        160        170        180 
NHCFSSKVYR EKTQKMNRKL AERYGDHPAL IMWHISNEYG GECHCDLCQE AFREWLKKEY 

       190        200        210        220        230        240 
NADLKALNDA WWGPFWSHTF TSWSQIQSPS PIGENAVHGL NLDWHRFVTD QTIDFYENEI 

       250        260        270        280        290        300 
VPMRELTPEI PITTNFMADT TDLIPFQSLD YSKFAKHVDV ISWDAYPAWH NDWESTAELA 

       310        320        330        340        350        360 
SKVAFIDDLY RSLKQQPFIL MESTPSGVNW HPVNKAKRPG MHLLSSMQML AHGSDSIMYF 

       370        380        390        400        410        420 
QWRKSRGSSE KFHGAVVDHD KSPENRVFKD VSDVGAVLKK LDNVVGSTRS AEVAFLYDWE 

       430        440        450        460        470        480 
SNWALDHAQG FGLETKQYPQ TIQKQYRSFW EKDIAVDVIT KEQDFSAYRL LVVPMLYLMS 

       490        500        510        520        530        540 
EETINQLKSF VSNGGVLVSG YMTGLVDEHD LAYLGGWPEQ LQEIFGMKPL ETDTLYPKDK 

       550        560        570        580        590        600 
NEIQYKGKNY LLKEYATIIE VEDATVIGTY QEDFYAHTPA ITKHAYGKGE SYYIGGRLEH 

       610        620        630        640        650        660 
SFYEDFYGQL IEELNLKPKL FIQHDKGVSV QTRQTEEEDI TFVMNFSEEE QKIVLTETVK 

       670        680 
DSLNDTILSG EVILDPYGFK VLSKKIK 

« Hide

References

[1]"Complete genome sequence of Carnobacterium sp. 17-4."
Voget S., Klippel B., Daniel R., Antranikian G.
J. Bacteriol. 193:3403-3404(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 17-4 EMBL AEB30613.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002563 Genomic DNA. Translation: AEB30613.1.
RefSeqYP_004375629.1. NC_015391.1.

3D structure databases

ProteinModelPortalF4BNE4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEB30613; AEB30613; CAR_c19560.
GeneID10442076.
KEGGcrn:CAR_c19560.
PATRIC54451442. VBICarSp108130_1928.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK12308.

Enzyme and pathway databases

BioCycCSP208596:GHHT-1956-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
3.40.50.880. 1 hit.
InterProIPR013739. Beta_galactosidase_C.
IPR013738. Beta_galactosidase_Trimer.
IPR029062. Class_I_gatase-like.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF02449. Glyco_hydro_42. 1 hit.
PF08533. Glyco_hydro_42C. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PIRSFPIRSF001084. B-galactosidase. 1 hit.
SUPFAMSSF51445. SSF51445. 1 hit.
SSF52317. SSF52317. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF4BNE4_CARS1
AccessionPrimary (citable) accession number: F4BNE4
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: July 9, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)