Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

F4BMP5 (F4BMP5_CARS1) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:sigL EMBL AEB29280.1
Ordered Locus Names:CAR_c05830 EMBL AEB29280.1
OrganismCarnobacterium sp. (strain 17-4) [Complete proteome] [HAMAP] EMBL AEB29280.1
Taxonomic identifier208596 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesCarnobacteriaceaeCarnobacterium

Protein attributes

Sequence length475 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
F4BMP5 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 22317D7C7EF0F5EF

FASTA47554,274
        10         20         30         40         50         60 
MTFSFKVRYA MITLSKLINT RGENVLNFEQ NYTQLQKQQL TMTPQLQQAI QMLQYNRKDL 

        70         80         90        100        110        120 
VDFLKQKSLE NPFISISVKS APRTQGTSTE KYNSNQSRTN QSTSGTIWDT LATTASTTSL 

       130        140        150        160        170        180 
YSAVIEQIHL SFRDTALRDL IIWLAQYIDH NGYLTLSMDD AITLTQAEPL KLLDALTLLQ 

       190        200        210        220        230        240 
QLEPAGVGAR NLQECLMLQT ERNGQAPNLA YLILEEEFEA FANRKWDHIA KRYAISLSEV 

       250        260        270        280        290        300 
QEVSDFVKTL TPHPGAIFSN APTQYIRPDL SVKVTDNQEI VVHSIKTGLP VIVFQKEYYE 

       310        320        330        340        350        360 
ELSVLQDKEV SKFINEKQSE YEWLKKTLIQ REETILRIGI AIVNAQKEFF LSEDRPIQSL 

       370        380        390        400        410        420 
TLKSIAEELD IHESTVSRSI NGKYITTEFG VFELKKFFTN ALVTTSKDGN GSISSNQIKK 

       430        440        450        460        470 
KIELFIQDED PRKPLSDQKL VDLLEKGGIE ISRRTVTKYR EALSISSSPK RKRFD 

« Hide

References

[1]"Complete genome sequence of Carnobacterium sp. 17-4."
Voget S., Klippel B., Daniel R., Antranikian G.
J. Bacteriol. 193:3403-3404(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 17-4 EMBL AEB29280.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002563 Genomic DNA. Translation: AEB29280.1.
RefSeqYP_004374296.1. NC_015391.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEB29280; AEB29280; CAR_c05830.
GeneID10440703.
KEGGcrn:CAR_c05830.
PATRIC54448679. VBICarSp108130_0589.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK03092.

Enzyme and pathway databases

BioCycCSP208596:GHHT-583-MONOMER.

Family and domain databases

InterProIPR000394. RNA_pol_sigma_54.
IPR007046. RNA_pol_sigma_54_core-bd.
IPR007634. RNA_pol_sigma_54_DNA-bd.
[Graphical view]
PfamPF00309. Sigma54_AID. 1 hit.
PF04963. Sigma54_CBD. 1 hit.
PF04552. Sigma54_DBD. 1 hit.
[Graphical view]
PIRSFPIRSF000774. RpoN. 1 hit.
PRINTSPR00045. SIGMA54FCT.
TIGRFAMsTIGR02395. rpoN_sigma. 1 hit.
PROSITEPS00718. SIGMA54_2. 1 hit.
PS50044. SIGMA54_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF4BMP5_CARS1
AccessionPrimary (citable) accession number: F4BMP5
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: April 16, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)