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F4BB66 (F4BB66_FRACF) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL AEE88127.1
Gene names
Ordered Locus Names:FNFX1_1742 EMBL AEE88127.1
OrganismFrancisella cf. novicida (strain Fx1) [Complete proteome] [HAMAP] EMBL AEE88127.1
Taxonomic identifier984129 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaThiotrichalesFrancisellaceaeFrancisella

Protein attributes

Sequence length448 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
F4BB66 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 61E1C141B324C3A7

FASTA44850,837
        10         20         30         40         50         60 
MALHGKKDTI NNLDFFEQSL PKFKLPLNSQ DPLEVYQEIK DELMLDGNSK QNLATFCQTE 

        70         80         90        100        110        120 
VDDFIHKLMD DCIDKNMIDK DEYPQTAEIE SRCVNILANL WNSSAENAIG CSTTSSSEAA 

       130        140        150        160        170        180 
MLGGMAMKWR WRDKMKAQGK DYTKPNLVTG PVQVCWHKFA RYWDIELREI PMSNESLIMT 

       190        200        210        220        230        240 
PEAVLERCDE NTIGVVPTLG VTFTGQYEPV EQVCKALDDF ERQTGIDIPV HVDAASGGFL 

       250        260        270        280        290        300 
APFVEPELKW DFRLPRVKSI NSSGHKFGLS PLGVGWVIWA DKKYLPDDLI FNVNYLGGNM 

       310        320        330        340        350        360 
PTFALNFSRP GGQIVAQYYN FVRLGLEGYK KVHQLCYDVA KYIAKELRKM EIFEIIHAGE 

       370        380        390        400        410        420 
GGIPAVSWSL KATKEYSLFD ISEKVRAKGW QIAAYTMPNN REDLVVMRVL VRRGFSYDLA 

       430        440 
QLMIRDLVAV IDSLEGKLKI LKRSSFAH 

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References

[1]"Common ancestry and novel genetic traits of Francisella novicida-like isolates from North America and Australia as revealed by comparative genomic analyses."
Siddaramappa S., Challacombe J.F., Petersen J.M., Pillai S., Hogg G., Kuske C.R.
Appl. Environ. Microbiol. 77:5110-5122(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Fx1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002557 Genomic DNA. Translation: AEE88127.1.
RefSeqYP_005826649.1. NC_017450.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEE88127; AEE88127; FNFX1_1742.
GeneID12436572.
KEGGfcf:FNFX1_1742.
PATRIC54257116. VBIFraCf186347_1731.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.
OMAERQTGID.

Enzyme and pathway databases

BioCycFNOV984129:GLDD-1783-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF4BB66_FRACF
AccessionPrimary (citable) accession number: F4BB66
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: October 16, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)