F4B158 (F4B158_KROS4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL AEE19296.1
EC=5.1.1.1 EMBL AEE19296.1

Gene names

Ordered Locus Names:

Krodi_1313

Organism

Krokinobacter sp. (strain 4H-3-7-5) (Krokinobacter diaphorus (strain 4H-3-7-5)) [Complete proteome] [HAMAP] EMBL AEE19296.1

Taxonomic identifier

983548 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Krokinobacter

Protein attributes

Sequence length	365 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. SAAS SAAS011079
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS011079
Molecular function	Isomerase SAAS SAAS011079 EMBL AEE19296.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	alanine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F4B158 [UniParc]. Last modified June 28, 2011. Version 1. Checksum: 69D66941D2EA12D8	FASTA	365	40,302
	10 20 30 40 50 60 MAITRLEIDL AALRHNYSYL RKKVAPSVKM MAVVKAFGYG SDAGAVAQEL EMLGVDYFAV 70 80 90 100 110 120 AYVSEGIALR DAGITTPILV LHPQPDTFDE LIERCLEPSI YSIRMMELFT AFAKGKGQEN 130 140 150 160 170 180 YPIHLKFNTG LNRLGFLNTD VSWILDRLRE NVSVKVASLF SHLVASEDPA EEEFTLNQIL 190 200 210 220 230 240 QFTNISKELL QALDYVPFMH MTNTSGVINY HRAHFDCVRI GIGLYGYGNS KEDTKKLKPV 250 260 270 280 290 300 ARLKSVISQI HHIKPGQSIG YNRAYKATEE IVTATLPIGH ADGISRSLGN GVGYVMIAGQ 310 320 330 340 350 360 KAPIVGNVCM DMLMVDITGI SCKEGDDVEV FGETTSAETL AGEMQSISYE LLTAIGQRVK RVILR

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete sequence of Krokinobacter diaphorus 4H-3-7-5." Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Piela B., Lochner A., Antranikian F.I., Woyke T. Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 4H-3-7-5.
[2]	"Complete sequence of Krokinobacter sp. 4H-3-7-5." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Piela B., Lochner A., Antranikian F.I., Woyke T. Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: 4H-3-7-5.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002528 Genomic DNA. Translation: AEE19296.1.
RefSeq	YP_004430564.1. NC_015496.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEE19296; AEE19296; Krodi_1313.
GeneID	10568354.
KEGG	kdi:Krodi_1313.
PATRIC	54569739. VBIKroSp190710_1354.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01775.
Enzyme and pathway databases
BioCyc	KSP983548:GHAF-1329-MONOMER.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

F4B158_KROS4

Accession

Primary (citable) accession number: F4B158

Entry history

Integrated into UniProtKB/TrEMBL:	June 28, 2011
Last sequence update:	June 28, 2011
Last modified:	April 3, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)