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F4AZL8 (F4AZL8_KROS4) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Krodi_2139 EMBL AEE20121.1
OrganismKrokinobacter sp. (strain 4H-3-7-5) (Krokinobacter diaphorus (strain 4H-3-7-5)) [Complete proteome] [HAMAP] EMBL AEE20121.1
Taxonomic identifier983548 [NCBI]
Taxonomic lineageBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeKrokinobacter

Protein attributes

Sequence length556 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL AEE20121.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2121 Potential EMBL AEE20121.1
Chain22 – 556535 Potential EMBL AEE20121.1
PRO_5000737944

Sequences

Sequence LengthMass (Da)Tools
F4AZL8 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 0591507BA16FF96C

FASTA55662,674
        10         20         30         40         50         60 
MNIKSLVALL LVILSVSSCK EQETALTQVD TQEKNPFFWE AANMYFLLTD RFNNGDTSND 

        70         80         90        100        110        120 
VNFERTQDAA VLRDFMGGDI KGITQKIEDG YFTDLGINAI WFTPVVEQVH GAVDEGTGVT 

       130        140        150        160        170        180 
YGYHGYWTKD WTSLDPNFGT REDLQSLVSA AHQKDIRIVM DVVLNHTGPV TEKDPFWGED 

       190        200        210        220        230        240 
WARENPNCAF STYENTTACS LVENLPDILT ESDQEVALPA TLVAKWKSEG RYDEEMAELD 

       250        260        270        280        290        300 
SYFTTNDLKK TPRNYIIKWL TDYIRDFGVD AFRVDTTKHV DEASWVALRA QADKAFADYK 

       310        320        330        340        350        360 
ANNEDKVMDN NDFFMFGEVY NYSIDGGRAY DFGDKKVDYF ANGFDNLINF QFKYDAQGSY 

       370        380        390        400        410        420 
EQLFSKYAVI KDSIFSDKSF VNYATSHDDG QPFDKDRNKA IETGTKLLLT TGISQIYYGD 

       430        440        450        460        470        480 
ETARDLTIDG TDGDATLRSF MNWDSINTAP TDEILAHWQK LGTFRRDHPS VGAGTHKMLS 

       490        500        510        520        530        540 
AAPYIFKRSF NKNGMTDTVV VGLDLNIGKK DIVVGNAFAK AQTVKDTYSG QEASIIDGKI 

       550 
TLDTPYDIVL LEVVKN 

« Hide

References

« Hide 'large scale' references
[1]"Complete sequence of Krokinobacter diaphorus 4H-3-7-5."
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Piela B., Lochner A., Antranikian F.I., Woyke T.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 4H-3-7-5.
[2]"Complete sequence of Krokinobacter sp. 4H-3-7-5."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Piela B., Lochner A., Antranikian F.I., Woyke T.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 4H-3-7-5.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002528 Genomic DNA. Translation: AEE20121.1.
RefSeqYP_004431389.1. NC_015496.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEE20121; AEE20121; Krodi_2139.
GeneID10569205.
KEGGkdi:Krodi_2139.
PATRIC54571503. VBIKroSp190710_2206.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Enzyme and pathway databases

BioCycKSP983548:GHAF-2181-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 2 hits.
InterProIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameF4AZL8_KROS4
AccessionPrimary (citable) accession number: F4AZL8
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: October 16, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)