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Protein

Aldose 1-epimerase

Gene

Krodi_0624

Organism
Dokdonia sp. (strain 4H-3-7-5) (Krokinobacter sp. (strain 4H-3-7-5))
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Converts alpha-aldose to the beta-anomer.UniRule annotation

Catalytic activityi

Alpha-D-glucose = beta-D-glucose.UniRule annotation

Pathwayi

GO - Molecular functioni

  1. aldose 1-epimerase activity Source: UniProtKB-EC
  2. carbohydrate binding Source: InterPro

GO - Biological processi

  1. hexose metabolic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationImported

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciKSP983548:GHAF-635-MONOMER.
UniPathwayiUPA00242.

Names & Taxonomyi

Protein namesi
Recommended name:
Aldose 1-epimeraseUniRule annotation (EC:5.1.3.3UniRule annotation)
Alternative name(s):
Galactose mutarotaseUniRule annotation
Gene namesi
Ordered Locus Names:Krodi_0624Imported
OrganismiDokdonia sp. (strain 4H-3-7-5) (Krokinobacter sp. (strain 4H-3-7-5))Imported
Taxonomic identifieri983548 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeDokdonia
ProteomesiUP000008290 Componenti: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the aldose epimerase family.UniRule annotation

Phylogenomic databases

KOiK01785.
OMAiNACNVPE.

Family and domain databases

Gene3Di2.70.98.10. 1 hit.
InterProiIPR015443. Aldose_1-epimerase.
IPR008183. Aldose_1/G6P_1-epimerase.
IPR011013. Gal_mutarotase_SF_dom.
IPR014718. Glyco_hydro-type_carb-bd_sub.
[Graphical view]
PfamiPF01263. Aldose_epim. 1 hit.
[Graphical view]
PIRSFiPIRSF005096. GALM. 1 hit.
SUPFAMiSSF74650. SSF74650. 1 hit.

Sequencei

Sequence statusi: Complete.

F4AYU8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTITKTSFGF TASGEEIFKF ILENPLGLRV EVLTYGATIQ KLYVPNETAG
60 70 80 90 100
TVDVVLGFDT LQEYEAPHPY LGSFIGRNAN RLKKEVVIEG KKIALSVNEG
110 120 130 140 150
ENQLHGGIKG FDKRVWDAVM KDDSLELSLD SEDGDQGFPG NLKVQITFKL
160 170 180 190 200
VGLRLEMQLS ATTDQPTIAN FTRHDYFNLC SGVKKAVVHH KLQIHGASYT
210 220 230 240 250
ELDGNMITTG HLLPVAGTPY DFTEVKAVGD ADEGFDLNYA LDKTPNKLRL
260 270 280 290 300
AAQVWAPDSD ITLKVHCTQP GLQFFSAKSI MLASGKKGYL ALESPGLCLE
310 320 330
PQYFPNSPSH SHFPSTILLP SEVYEEQIVY DFE
Length:333
Mass (Da):36,754
Last modified:June 27, 2011 - v1
Checksum:iC79E9DBA868BB596
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002528 Genomic DNA. Translation: AEE18609.1.
RefSeqiWP_013750117.1. NC_015496.1.
YP_004429877.1. NC_015496.1.

Genome annotation databases

EnsemblBacteriaiAEE18609; AEE18609; Krodi_0624.
KEGGikdi:Krodi_0624.
PATRICi54568311. VBIKroSp190710_0647.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002528 Genomic DNA. Translation: AEE18609.1.
RefSeqiWP_013750117.1. NC_015496.1.
YP_004429877.1. NC_015496.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEE18609; AEE18609; Krodi_0624.
KEGGikdi:Krodi_0624.
PATRICi54568311. VBIKroSp190710_0647.

Phylogenomic databases

KOiK01785.
OMAiNACNVPE.

Enzyme and pathway databases

UniPathwayiUPA00242.
BioCyciKSP983548:GHAF-635-MONOMER.

Family and domain databases

Gene3Di2.70.98.10. 1 hit.
InterProiIPR015443. Aldose_1-epimerase.
IPR008183. Aldose_1/G6P_1-epimerase.
IPR011013. Gal_mutarotase_SF_dom.
IPR014718. Glyco_hydro-type_carb-bd_sub.
[Graphical view]
PfamiPF01263. Aldose_epim. 1 hit.
[Graphical view]
PIRSFiPIRSF005096. GALM. 1 hit.
SUPFAMiSSF74650. SSF74650. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequences of Krokinobacter sp. strain 4H-3-7-5 and Lacinutrix sp. strain 5H-3-7-4, polysaccharide-degrading members of the family Flavobacteriaceae."
    Klippel B., Lochner A., Bruce D.C., Walston Davenport K., Detter C., Goodwin L.A., Han J., Han S., Hauser L., Land M.L., Nolan M., Ovchinnikova G., Pennacchio L., Pitluck S., Tapia R., Woyke T., Wiebusch S., Basner A.
    , Abe F., Horikoshi K., Keller M., Antranikian G.
    J. Bacteriol. 193:4545-4546(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 4H-3-7-5Imported.
  2. "Complete sequence of Krokinobacter diaphorus 4H-3-7-5."
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Piela B., Lochner A., Antranikian F.I., Woyke T.
    Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 4H-3-7-5Imported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 4H-3-7-5.

Entry informationi

Entry nameiF4AYU8_DOKS4
AccessioniPrimary (citable) accession number: F4AYU8
Entry historyi
Integrated into UniProtKB/TrEMBL: June 27, 2011
Last sequence update: June 27, 2011
Last modified: March 31, 2015
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.