F4ATC4 (F4ATC4_GLAS4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase [Cu-Zn] RuleBase RU000393
EC=1.15.1.1 RuleBase RU000393

Gene names

Ordered Locus Names:

Glaag_2446 EMBL AEE23388.1

Organism

Glaciecola sp. (strain 4H-3-7+YE-5) [Complete proteome] [HAMAP] EMBL AEE23388.1

Taxonomic identifier

983545 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Alteromonadaceae › Glaciecola

Protein attributes

Sequence length	180 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000393
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000393
Cofactor	Binds 1 copper ion per subunit By similarity. RuleBase RU000393 Binds 1 zinc ion per subunit By similarity. RuleBase RU000393
Sequence similarities	Belongs to the Cu-Zn superoxide dismutase family. RuleBase RU000393

Ontologies

Keywords
Domain	Signal EMBL AEE23388.1
Ligand	Copper RuleBase RU000393 Metal-binding RuleBase RU000393 Zinc RuleBase RU000393
Molecular function	Oxidoreductase RuleBase RU000393 EMBL AEE23388.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 24	24	Potential EMBL AEE23388.1
	Chain	25 – 180	156	Potential		PRO_5000737589

Sequences

	Sequence		Length	Mass (Da)
	F4ATC4 [UniParc]. Last modified June 28, 2011. Version 1. Checksum: 09035436280619EA	FASTA	180	18,729
	10 20 30 40 50 60 MKKFLLPILA GSISLALSTA SFAGDSEDGK KIVMNDLKTG ESIGSVMVRD YDDDGVVFTP 70 80 90 100 110 120 ELSGLTPGMH GFHIHENGDC SSAMKDGKNV LGGAAGGHFD PEDTGKHSVP WSEKGHEGDL 130 140 150 160 170 180 PTLFVDNNGK ASKPIFAPEL ELDDIEGRAL MIHAGGDNYS DSPEKLGGGG SRVACGVIGD

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of the marine cellulose- and xylan-degrading bacterium Glaciecola sp. strain 4H-3-7+YE-5." US DOE Joint Genome Institute Klippel B., Lochner A., Bruce D.C., Walston Davenport K., Detter C., Goodwin L.A., Han J., Han S., Land M.L., Mikhailova N., Nolan M., Pennacchio L., Pitluck S., Tapia R., Woyke T., Wiebusch S., Basner A., Abe F. , Horikoshi K., Keller M., Antranikian G. J. Bacteriol. 193:4547-4548(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 4H-3-7+YE-5 EMBL AEE23388.1.
[2]	"Complete sequence of chromosome of Glaciecola sp. 4H-3-7+YE-5." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Piela B., Lochner A., Antranikian F.I., Woyke T. Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: 4H-3-7+YE-5.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002526 Genomic DNA. Translation: AEE23388.1.
RefSeq	YP_004434656.1. NC_015497.1.
3D structure databases
ProteinModelPortal	F4ATC4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEE23388; AEE23388; Glaag_2446.
GeneID	10572593.
KEGG	gag:Glaag_2446.
PATRIC	54578617. VBIGlaSp182133_2599.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K04565.
Enzyme and pathway databases
BioCyc	GSP983545:GH3Q-2834-MONOMER.
Family and domain databases
Gene3D	2.60.40.200. 1 hit.
InterPro	IPR024134. SOD_Cu/Zn_/chaperones. IPR018152. SOD_Cu/Zn_BS. IPR001424. SOD_Cu_Zn_dom. [Graphical view]
PANTHER	PTHR10003. PTHR10003. 1 hit.
Pfam	PF00080. Sod_Cu. 1 hit. [Graphical view]
SUPFAM	SSF49329. SOD_Cu_Zn. 1 hit.
PROSITE	PS00087. SOD_CU_ZN_1. 1 hit. PS00332. SOD_CU_ZN_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F4ATC4_GLAS4

Accession

Primary (citable) accession number: F4ATC4

Entry history

Integrated into UniProtKB/TrEMBL:	June 28, 2011
Last sequence update:	June 28, 2011
Last modified:	April 3, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)