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F4AMS7 (F4AMS7_GLAS4) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length194 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. HAMAP-Rule MF_00124 SAAS SAAS020634

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00124 SAAS SAAS020633

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00124 SAAS SAAS020633.

Sequence similarities

Belongs to the thymidine kinase family. HAMAP-Rule MF_00124 RuleBase RU004165

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding9 – 168ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding87 – 904ATP By similarity HAMAP-Rule MF_00124

Sites

Active site881Proton acceptor By similarity HAMAP-Rule MF_00124
Metal binding1451Zinc By similarity HAMAP-Rule MF_00124
Metal binding1471Zinc By similarity HAMAP-Rule MF_00124
Metal binding1821Zinc By similarity HAMAP-Rule MF_00124
Metal binding1851Zinc By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
F4AMS7 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 5F5BD97CCCA4434E

FASTA19421,842
        10         20         30         40         50         60 
MAQLYFYYSA MNAGKSTSLL QSAYNYKERG MRAAIFTAAL DDRFGIGKVA SRIGLEASAH 

        70         80         90        100        110        120 
LFNGTSDLHE QISTLHKDKK LDCVFIDEAQ FLNKQQVQQL VSVVDDLDIP VLAYGLRTDF 

       130        140        150        160        170        180 
VGETFEGSRY LMAWADKLIE LKTICHCGRK ATFVVRLDEH GNAAKEGAQV EVGGNDRYES 

       190 
MCRKHFKELV WDQA 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of the marine, cellulose and xylan degrading bacterium Glaciecola sp. 4H-3-7+YE-5."
US DOE Joint Genome Institute
Klippel B., Lochner A., Bruce D.C., Davenport K.W., Detter C., Goodwin L.A., Han J., Han S., Land M.L., Mikhailova N., Nolan M., Pennacchio L., Pitluck S., Tapia R., Woyke T., Wiebusch S., Basner A., Abe F. expand/collapse author list , Horikoshi K., Keller M., Antranikian G.
J. Bacteriol. 193:4547-4548(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 4H-3-7+YE-5 EMBL AEE21660.1.
[2]"Complete sequence of chromosome of Glaciecola sp. 4H-3-7+YE-5."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Piela B., Lochner A., Antranikian F.I., Woyke T.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 4H-3-7+YE-5.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002526 Genomic DNA. Translation: AEE21660.1.
RefSeqYP_004432928.1. NC_015497.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEE21660; AEE21660; Glaag_0697.
GeneID10570811.
KEGGgag:Glaag_0697.
PATRIC54574786. VBIGlaSp182133_0722.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00857.

Enzyme and pathway databases

BioCycGSP983545:GH3Q-720-MONOMER.

Family and domain databases

HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020633. Thymidine_kinase_CS.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00603. TK_CELLULAR_TYPE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF4AMS7_GLAS4
AccessionPrimary (citable) accession number: F4AMS7
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: April 16, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)