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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Glaciecola sp. (strain 4H-3-7+YE-5)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Mg2+UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei133 – 1331UniRule annotation
Active sitei538 – 5381UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Enzyme and pathway databases

BioCyciGSP983545:GH3Q-701-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotationSAAS annotation (EC:4.1.1.31UniRule annotationSAAS annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:Glaag_0678Imported
OrganismiGlaciecola sp. (strain 4H-3-7+YE-5)Imported
Taxonomic identifieri983545 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeGlaciecola
ProteomesiUP000006544: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

KOiK01595.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F4AMQ8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPKILDSQLK ETVRNLGSTL GDMIRAQLGD EWLQRIEAIR LDGRESYKGD
60 70 80 90 100
TDCSDKLKAL FSELEDEQLL VVGRAFSQFL NLANIAEQEF NSANHDQDSI
110 120 130 140 150
QELFNHLDKD NVSAETFEKA VNQLSIELVL TAHPTEVTRR TLIHKHSELA
160 170 180 190 200
QCLRQIHQTS LTDIERDKIR TRISDLVAQA WHTEEIRTVR PTPVDEARWG
210 220 230 240 250
FSVIENSLWE AVPDFVRELS TKFEAKYDLA LPLDAAPVKL SSWMGGDRDG
260 270 280 290 300
NPFVTSKVTQ QVLLLARKRA AKLFAQDVDM LQVELSMSDC DDTIRAKVGD
310 320 330 340 350
ELEPYRALLR PLLNKLTNTK NGIAEFLNGE AVDDSEWISS KDELLTPLML
360 370 380 390 400
CYNSLQACGM SVIADGRLLD TIRRVHCFGV HLLKLDIRQD SERHADVFSE
410 420 430 440 450
LTRHLGMGDY ANWSEEDKQA FLLKELSSKR PLFPSKWQPS ADVQEVIDTC
460 470 480 490 500
KVVAQHSEEG FGIYIISMAS LPSDVLSVHL LLREFGVTWP MPVAPLFETL
510 520 530 540 550
DDLNAASSVI DALMNIDWYR GYIQGHQYVM IGYSDSAKDA GAMAAGWAQY
560 570 580 590 600
ESQEALVAIA EKFGVELTLF HGRGGTIGRG GLPAHAAILS QPPGSLSGGF
610 620 630 640 650
RVTEQGETIR YKFGMPQLAQ RSLSLYASAI LEALISPPPA PKQEWRDLIT
660 670 680 690 700
EVAANARDNY RNTVRHDESF VPYFRVATPE QELGKLPLGS RPAKRKPSGG
710 720 730 740 750
IESLRAIPWI FAWAQTRLVL PSWLGAMKAV QTAIDAGHRP LIDDMLANWP
760 770 780 790 800
FFHSRFSMLD MVFGKADPRI SAEYDKRLVP EELRHLGDAL RDELNMSMSL
810 820 830 840 850
LLDVLQQKEV MESDPKGNES MNIRAGYLQP LHFLQIELLE RIRAKGDEAD
860 870
PTLERAMMVT IAGIAVGMRN TG
Length:872
Mass (Da):97,760
Last modified:June 28, 2011 - v1
Checksum:iDD3CBAA7F7434AC6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002526 Genomic DNA. Translation: AEE21641.1.
RefSeqiYP_004432909.1. NC_015497.1.

Genome annotation databases

EnsemblBacteriaiAEE21641; AEE21641; Glaag_0678.
GeneIDi10570792.
KEGGigag:Glaag_0678.
PATRICi54574746. VBIGlaSp182133_0702.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002526 Genomic DNA. Translation: AEE21641.1.
RefSeqiYP_004432909.1. NC_015497.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEE21641; AEE21641; Glaag_0678.
GeneIDi10570792.
KEGGigag:Glaag_0678.
PATRICi54574746. VBIGlaSp182133_0702.

Phylogenomic databases

KOiK01595.

Enzyme and pathway databases

BioCyciGSP983545:GH3Q-701-MONOMER.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 4H-3-7+YE-5Imported.
  2. "Complete sequence of chromosome of Glaciecola sp. 4H-3-7+YE-5."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Piela B., Lochner A., Antranikian F.I., Woyke T.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 4H-3-7+YE-5.

Entry informationi

Entry nameiF4AMQ8_GLAS4
AccessioniPrimary (citable) accession number: F4AMQ8
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: February 4, 2015
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.