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F4AKS5

- F4AKS5_GLAS4

UniProt

F4AKS5 - F4AKS5_GLAS4

Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

Glaag_3920

Organism
Glaciecola sp. (strain 4H-3-7+YE-5)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 20 (01 Oct 2014)
      Sequence version 1 (28 Jun 2011)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. carboxy-lyase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. carboxylic acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotation

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciGSP983545:GH3Q-3998-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Pyridoxal-dependent decarboxylaseImported
    Gene namesi
    Ordered Locus Names:Glaag_3920Imported
    OrganismiGlaciecola sp. (strain 4H-3-7+YE-5)Imported
    Taxonomic identifieri983545 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeGlaciecola
    ProteomesiUP000006544: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    KOiK01580.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    F4AKS5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAVAEVSLEH LFRVFTMPEG KDSKLAQIEQ HLSDNLADFL SQHVVTKVTS    50
    LEQIEQSFAE FNVPEHPEFV SEHAANLLEK LVANSVNTYS PTFIGHMTSA 100
    LPYFHLSLAK LLVGLNQNLV KIETSKAFTP LERQVLGMMH ELVYAQDSEF 150
    YNTYLHSANH ALGAFCSGGT IANVTALWVA RNKALAADGV FKGVAREGLA 200
    AGLDHYGYKK MAILSSRRGH YSLSKSVDLL GLGREQLITL DCPTQRLSPE 250
    KALAFGKQYA EQGNKILSIV GVAGTTETGH VDPLDELADV AQELGCHFHV 300
    DAAWGGATLF SSTHRNILKG IQRADSVTID AHKQMYVPMG AGMVLFKDPN 350
    DSNAVRHHAN YILRAGSKDL GATTLEGSRN GMAMMVYASL HIFGRQGYEL 400
    LIDQSIDKAK IFARMIQSHP DFELITPPTL SLLTYRVNPQ EVQQQVKADP 450
    SLSPHFNEKL DKLTVYVQKQ QREAGKSFVS RTRLQTQTYG EQTMTVFRVV 500
    LANPLTTEKD LQNILDEQVA IASKSQNWAE LTNTE 535
    Length:535
    Mass (Da):59,125
    Last modified:June 28, 2011 - v1
    Checksum:i47B0FC5FC7011D0B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002526 Genomic DNA. Translation: AEE24846.1.
    RefSeqiWP_013754856.1. NC_015497.1.
    YP_004436114.1. NC_015497.1.

    Genome annotation databases

    EnsemblBacteriaiAEE24846; AEE24846; Glaag_3920.
    GeneIDi10574088.
    KEGGigag:Glaag_3920.
    PATRICi54581766. VBIGlaSp182133_4144.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002526 Genomic DNA. Translation: AEE24846.1 .
    RefSeqi WP_013754856.1. NC_015497.1.
    YP_004436114.1. NC_015497.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEE24846 ; AEE24846 ; Glaag_3920 .
    GeneIDi 10574088.
    KEGGi gag:Glaag_3920.
    PATRICi 54581766. VBIGlaSp182133_4144.

    Phylogenomic databases

    KOi K01580.

    Enzyme and pathway databases

    BioCyci GSP983545:GH3Q-3998-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 4H-3-7+YE-5Imported.
    2. "Complete sequence of chromosome of Glaciecola sp. 4H-3-7+YE-5."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Piela B., Lochner A., Antranikian F.I., Woyke T.
      Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 4H-3-7+YE-5.

    Entry informationi

    Entry nameiF4AKS5_GLAS4
    AccessioniPrimary (citable) accession number: F4AKS5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 28, 2011
    Last sequence update: June 28, 2011
    Last modified: October 1, 2014
    This is version 20 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3