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F4AKS5 (F4AKS5_GLAS4) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Glaag_3920 EMBL AEE24846.1
OrganismGlaciecola sp. (strain 4H-3-7+YE-5) [Complete proteome] [HAMAP] EMBL AEE24846.1
Taxonomic identifier983545 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeGlaciecola

Protein attributes

Sequence length535 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
F4AKS5 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 47B0FC5FC7011D0B

FASTA53559,125
        10         20         30         40         50         60 
MAVAEVSLEH LFRVFTMPEG KDSKLAQIEQ HLSDNLADFL SQHVVTKVTS LEQIEQSFAE 

        70         80         90        100        110        120 
FNVPEHPEFV SEHAANLLEK LVANSVNTYS PTFIGHMTSA LPYFHLSLAK LLVGLNQNLV 

       130        140        150        160        170        180 
KIETSKAFTP LERQVLGMMH ELVYAQDSEF YNTYLHSANH ALGAFCSGGT IANVTALWVA 

       190        200        210        220        230        240 
RNKALAADGV FKGVAREGLA AGLDHYGYKK MAILSSRRGH YSLSKSVDLL GLGREQLITL 

       250        260        270        280        290        300 
DCPTQRLSPE KALAFGKQYA EQGNKILSIV GVAGTTETGH VDPLDELADV AQELGCHFHV 

       310        320        330        340        350        360 
DAAWGGATLF SSTHRNILKG IQRADSVTID AHKQMYVPMG AGMVLFKDPN DSNAVRHHAN 

       370        380        390        400        410        420 
YILRAGSKDL GATTLEGSRN GMAMMVYASL HIFGRQGYEL LIDQSIDKAK IFARMIQSHP 

       430        440        450        460        470        480 
DFELITPPTL SLLTYRVNPQ EVQQQVKADP SLSPHFNEKL DKLTVYVQKQ QREAGKSFVS 

       490        500        510        520        530 
RTRLQTQTYG EQTMTVFRVV LANPLTTEKD LQNILDEQVA IASKSQNWAE LTNTE 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of the marine, cellulose and xylan degrading bacterium Glaciecola sp. 4H-3-7+YE-5."
US DOE Joint Genome Institute
Klippel B., Lochner A., Bruce D.C., Davenport K.W., Detter C., Goodwin L.A., Han J., Han S., Land M.L., Mikhailova N., Nolan M., Pennacchio L., Pitluck S., Tapia R., Woyke T., Wiebusch S., Basner A., Abe F. expand/collapse author list , Horikoshi K., Keller M., Antranikian G.
J. Bacteriol. 193:4547-4548(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 4H-3-7+YE-5 EMBL AEE24846.1.
[2]"Complete sequence of chromosome of Glaciecola sp. 4H-3-7+YE-5."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Piela B., Lochner A., Antranikian F.I., Woyke T.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 4H-3-7+YE-5.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002526 Genomic DNA. Translation: AEE24846.1.
RefSeqYP_004436114.1. NC_015497.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEE24846; AEE24846; Glaag_3920.
GeneID10574088.
KEGGgag:Glaag_3920.
PATRIC54581766. VBIGlaSp182133_4144.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.

Enzyme and pathway databases

BioCycGSP983545:GH3Q-3998-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF4AKS5_GLAS4
AccessionPrimary (citable) accession number: F4AKS5
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: December 11, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)