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F4AK89

- F4AK89_GLAS4

UniProt

F4AK89 - F4AK89_GLAS4

Protein

Alpha-amylase

Gene

Glaag_0458

Organism
Glaciecola sp. (strain 4H-3-7+YE-5)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 22 (01 Oct 2014)
      Sequence version 1 (28 Jun 2011)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Enzyme and pathway databases

    BioCyciGSP983545:GH3Q-475-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:Glaag_0458Imported
    OrganismiGlaciecola sp. (strain 4H-3-7+YE-5)Imported
    Taxonomic identifieri983545 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeGlaciecola
    ProteomesiUP000006544: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    KOiK01176.

    Family and domain databases

    Gene3Di3.20.20.80. 2 hits.
    InterProiIPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    F4AK89-1 [UniParc]FASTAAdd to Basket

    « Hide

    MFTHYHKAQS AYQLAYRCVL IMFMLNSAST LASPAPQSNS VDPFWQNATV    50
    YFMMTDRFAN GDKSNDKQFA RKPDGATLRN FMGGDIKGVT QKIKSGYFTE 100
    LGVDVLWLTP LNEQIHGRWD DEWGRSYPFH GYWIKDWTAI DPNFGTEQDM 150
    AEMIATAHAH GIKVLADVII NHTGPKTSKD VAWPDEWVRT KPYCSWDSYQ 200
    GNVECALASS LTDIRTESEA PVTLPPFLIE KWRSEGRLEQ ELAELNAFFE 250
    RTELPRAPKY YITKWITDWV REYGIDGFRV DTAKHVEADV WKIVKAEGTT 300
    ALAQWKAEHP EQASDNKPFF MVGEVMHFGV DGFKNTPKGT RLYDYGDKQV 350
    DFFANGFDSL INMGFAAHAE QDMEQIFSTY SHELNQGALQ GVSVLNYVVS 400
    HDDPEPFDPK REHPYQAALK LMLAPGSAQI YYGDELARNL TYPDAVGDAT 450
    WRSFMNWQDL APADNNAEQL TPKQQYTQQL LKHWQKLGQF RHAHLSVGAG 500
    VHKMLQEKPY VFQRTLGATK QNAADQVLVA IGMPKGSKVI ELHKLFEEGA 550
    ELKEYYSGTT VTVNDNQVIL DTPFDIVLLG ALEQ 584
    Length:584
    Mass (Da):66,274
    Last modified:June 28, 2011 - v1
    Checksum:i3CBBC80A33EFDB52
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002526 Genomic DNA. Translation: AEE21421.1.
    RefSeqiWP_013752750.1. NC_015497.1.
    YP_004432689.1. NC_015497.1.

    Genome annotation databases

    EnsemblBacteriaiAEE21421; AEE21421; Glaag_0458.
    GeneIDi10570566.
    KEGGigag:Glaag_0458.
    PATRICi54574285. VBIGlaSp182133_0478.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002526 Genomic DNA. Translation: AEE21421.1 .
    RefSeqi WP_013752750.1. NC_015497.1.
    YP_004432689.1. NC_015497.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEE21421 ; AEE21421 ; Glaag_0458 .
    GeneIDi 10570566.
    KEGGi gag:Glaag_0458.
    PATRICi 54574285. VBIGlaSp182133_0478.

    Phylogenomic databases

    KOi K01176.

    Enzyme and pathway databases

    BioCyci GSP983545:GH3Q-475-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 2 hits.
    InterProi IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 4H-3-7+YE-5Imported.
    2. "Complete sequence of chromosome of Glaciecola sp. 4H-3-7+YE-5."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Piela B., Lochner A., Antranikian F.I., Woyke T.
      Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 4H-3-7+YE-5.

    Entry informationi

    Entry nameiF4AK89_GLAS4
    AccessioniPrimary (citable) accession number: F4AK89
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 28, 2011
    Last sequence update: June 28, 2011
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3