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F4ABI4

- F4ABI4_CLOBO

UniProt

F4ABI4 - F4ABI4_CLOBO

Protein
Submitted name:

PolyA polymerase family protein

Gene

pcnB

Organism
Clostridium botulinum BKT015925
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 21 (01 Oct 2014)
      Sequence version 1 (28 Jun 2011)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    A tRNA precursor + 2 CTP + ATP = a tRNA with a 3' CCA end + 3 diphosphate.SAAS annotation

    GO - Molecular functioni

    1. ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity Source: UniProtKB-EC
    2. ATP binding Source: UniProtKB-KW
    3. CTP:3'-cytidine-tRNA cytidylyltransferase activity Source: UniProtKB-EC
    4. CTP:tRNA cytidylyltransferase activity Source: UniProtKB-EC
    5. RNA binding Source: UniProtKB-KW

    GO - Biological processi

    1. tRNA 3'-terminal CCA addition Source: UniProtKB-EC

    Keywords - Molecular functioni

    NucleotidyltransferaseSAAS annotationImported, Transferase

    Keywords - Ligandi

    ATP-bindingSAAS annotation, Nucleotide-binding, RNA-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciCBOT929506:GHKW-2938-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    PolyA polymerase family proteinImported (EC:2.7.7.72Imported)
    Gene namesi
    Name:pcnBImported
    ORF Names:CbC4_5080Imported
    Encoded oniPlasmid p2BKT015925Imported
    OrganismiClostridium botulinum BKT015925Imported
    Taxonomic identifieri929506 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
    ProteomesiUP000007806: Plasmid p2BKT015925

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.UniRule annotation

    Phylogenomic databases

    KOiK00974.

    Family and domain databases

    InterProiIPR002646. PolA_pol_head_dom.
    [Graphical view]
    PfamiPF01743. PolyA_pol. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F4ABI4-1 [UniParc]FASTAAdd to Basket

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    MEIKMPKCVG YIIHKLQEFN YEAYIVGGCV RDSLLKKTPN DWDITTSALP    50
    NKVVDIFQNL GYKIIPTGLK HGTVTIVINN EHYEVTTYRI DGEYEDNRHP 100
    KKVEFTRNLK EDLSRRDFTI NSMAYNDKDG LVDYFNSKND LESGIVKSVG 150
    DPMKRFSEDA LRILRAYRFA AQLGFVIEDE TLSATMQVKD NLKSISIERI 200
    RDEIDKMLLA NSSIFFELSK FGVLEVILPE LYQCFNVEQN NPYHVKNVFN 250
    HIINATLNIE PKLHLKLTML LHDICKPQCK TTDEKGIDHF YNHAELSSNK 300
    SKEILKRMKY DNNTIDKVST LVKYHDREIG SNKSIRKLLS LIGEDNFRDL 350
    LKVKEADIKA QNLKYYDERH NKLIEIEHKL NDIISKNQCF SLKDLKVNGR 400
    DLIELGYTGK EIGHILNDLL EKVLENPDLN NKDTLIGMIR 440
    Length:440
    Mass (Da):50,995
    Last modified:June 28, 2011 - v1
    Checksum:iA2784543EE67B3ED
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002412 Genomic DNA. Translation: AEB77501.1.
    RefSeqiWP_013726782.1. NC_015426.1.
    YP_004397277.1. NC_015426.1.

    Genome annotation databases

    EnsemblBacteriaiAEB77501; AEB77501; CbC4_5080.
    GeneIDi10462867.
    KEGGicbn:CbC4_5080.
    PATRICi54460700. VBICloBot178872_2931.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002412 Genomic DNA. Translation: AEB77501.1 .
    RefSeqi WP_013726782.1. NC_015426.1.
    YP_004397277.1. NC_015426.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEB77501 ; AEB77501 ; CbC4_5080 .
    GeneIDi 10462867.
    KEGGi cbn:CbC4_5080.
    PATRICi 54460700. VBICloBot178872_2931.

    Phylogenomic databases

    KOi K00974.

    Enzyme and pathway databases

    BioCyci CBOT929506:GHKW-2938-MONOMER.

    Family and domain databases

    InterProi IPR002646. PolA_pol_head_dom.
    [Graphical view ]
    Pfami PF01743. PolyA_pol. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Clostridium botulinum group III: a group with dual identity shaped by plasmids, phages and mobile elements."
      Skarin H., Hafstrom T., Westerberg J., Segerman B.
      BMC Genomics 12:185-185(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BKT015925Imported.

    Entry informationi

    Entry nameiF4ABI4_CLOBO
    AccessioniPrimary (citable) accession number: F4ABI4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 28, 2011
    Last sequence update: June 28, 2011
    Last modified: October 1, 2014
    This is version 21 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported, PlasmidImported

    External Data

    Dasty 3