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Protein
Submitted name:

PolyA polymerase family protein

Gene

pcnB

Organism
Clostridium botulinum BKT015925
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

A tRNA precursor + 2 CTP + ATP = a tRNA with a 3' CCA end + 3 diphosphate.SAAS annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

NucleotidyltransferaseSAAS annotationImported, Transferase

Keywords - Ligandi

ATP-bindingSAAS annotation, Nucleotide-binding, RNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciCBOT929506:GHKW-2938-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
PolyA polymerase family proteinImported (EC:2.7.7.72Imported)
Gene namesi
Name:pcnBImported
ORF Names:CbC4_5080Imported
Encoded oniPlasmid p2BKT015925Imported
OrganismiClostridium botulinum BKT015925Imported
Taxonomic identifieri929506 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
ProteomesiUP000007806 Componenti: Plasmid p2BKT015925

Family & Domainsi

Sequence similaritiesi

Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.UniRule annotation

Phylogenomic databases

KOiK00974.

Family and domain databases

InterProiIPR002646. PolA_pol_head_dom.
[Graphical view]
PfamiPF01743. PolyA_pol. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F4ABI4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEIKMPKCVG YIIHKLQEFN YEAYIVGGCV RDSLLKKTPN DWDITTSALP
60 70 80 90 100
NKVVDIFQNL GYKIIPTGLK HGTVTIVINN EHYEVTTYRI DGEYEDNRHP
110 120 130 140 150
KKVEFTRNLK EDLSRRDFTI NSMAYNDKDG LVDYFNSKND LESGIVKSVG
160 170 180 190 200
DPMKRFSEDA LRILRAYRFA AQLGFVIEDE TLSATMQVKD NLKSISIERI
210 220 230 240 250
RDEIDKMLLA NSSIFFELSK FGVLEVILPE LYQCFNVEQN NPYHVKNVFN
260 270 280 290 300
HIINATLNIE PKLHLKLTML LHDICKPQCK TTDEKGIDHF YNHAELSSNK
310 320 330 340 350
SKEILKRMKY DNNTIDKVST LVKYHDREIG SNKSIRKLLS LIGEDNFRDL
360 370 380 390 400
LKVKEADIKA QNLKYYDERH NKLIEIEHKL NDIISKNQCF SLKDLKVNGR
410 420 430 440
DLIELGYTGK EIGHILNDLL EKVLENPDLN NKDTLIGMIR
Length:440
Mass (Da):50,995
Last modified:June 28, 2011 - v1
Checksum:iA2784543EE67B3ED
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002412 Genomic DNA. Translation: AEB77501.1.

Genome annotation databases

EnsemblBacteriaiAEB77501; AEB77501; CbC4_5080.
KEGGicbn:CbC4_5080.
PATRICi54460700. VBICloBot178872_2931.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002412 Genomic DNA. Translation: AEB77501.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEB77501; AEB77501; CbC4_5080.
KEGGicbn:CbC4_5080.
PATRICi54460700. VBICloBot178872_2931.

Phylogenomic databases

KOiK00974.

Enzyme and pathway databases

BioCyciCBOT929506:GHKW-2938-MONOMER.

Family and domain databases

InterProiIPR002646. PolA_pol_head_dom.
[Graphical view]
PfamiPF01743. PolyA_pol. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Clostridium botulinum group III: a group with dual identity shaped by plasmids, phages and mobile elements."
    Skarin H., Hafstrom T., Westerberg J., Segerman B.
    BMC Genomics 12:185-185(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BKT015925Imported.

Entry informationi

Entry nameiF4ABI4_CLOBO
AccessioniPrimary (citable) accession number: F4ABI4
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: July 22, 2015
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported, PlasmidImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.