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F4A740 (F4A740_CLOBO) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Thymidine kinase RuleBase RU000544

EC=2.7.1.21 RuleBase RU000544
Gene names
ORF Names:CbC4_2284 EMBL AEB76949.1
OrganismClostridium botulinum BKT015925 [Complete proteome] EMBL AEB76949.1
Taxonomic identifier929506 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length187 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate.

Sequence similarities

Belongs to the thymidine kinase family. RuleBase RU004165

Ontologies

Keywords
   Biological processDNA synthesis RuleBase RU000544
   LigandATP-binding RuleBase RU000544
Nucleotide-binding
   Molecular functionKinase RuleBase RU000544 EMBL AEB76949.1
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA replication

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

thymidine kinase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F4A740 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: AF80C2692CACDB5E

FASTA18721,345
        10         20         30         40         50         60 
MNSGKSTNLM QVAHNYEERG MKVIIIKPKR DSKGGDKVIS RLGVTRKVDM LLDVNENAYE 

        70         80         90        100        110        120 
RVQQICNEEG TLNCILVDEV QFLKKEQIDQ LFEIAVKLNI PTICYGLRTD FQMNGFEGSM 

       130        140        150        160        170        180 
RLLLLAHSIE ELKTICSCGK KASLNGRKIN GKFVFQGEQI AIDKEDNVEY ESLCPKCYLE 


YRDGLKR 

« Hide

References

[1]"Clostridium botulinum group III: a group with dual identity shaped by plasmids, phages and mobile elements."
Skarin H., Hafstrom T., Westerberg J., Segerman B.
BMC Genomics 12:185-185(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BKT015925 EMBL AEB76949.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002410 Genomic DNA. Translation: AEB76949.1.
RefSeqYP_004396946.1. NC_015425.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEB76949; AEB76949; CbC4_2284.
GeneID10465241.
KEGGcbn:CbC4_2284.
PATRIC54459962. VBICloBot178872_2596.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00857.

Enzyme and pathway databases

BioCycCBOT929506:GHKW-2349-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF4A740_CLOBO
AccessionPrimary (citable) accession number: F4A740
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: April 16, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)