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F4A1P4 (F4A1P4_MAHA5) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Endonuclease III; DNA-(Apurinic or apyrimidinic site) lyase EMBL AEE97094.1
EC=3.2.2.- EMBL AEE97094.1
EC=4.2.99.18 EMBL AEE97094.1
Gene names
Ordered Locus Names:Mahau_1918
OrganismMahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) [Complete proteome] [HAMAP] EMBL AEE97094.1
Taxonomic identifier697281 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Thermoanaerobacterales › Thermoanaerobacterales Family IV. Incertae Sedis › Mahella ›

Protein attributes

Sequence length213 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
F4A1P4 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 0D3885B3ECF4E51E

FASTA21323,988
        10         20         30         40         50         60 
MKTRDDIEHI LDILADCYPQ AKTALVYSNA FELLIATILS AQSTDKQVNK VTGKLFGKYK 

        70         80         90        100        110        120 
TPEDFAALEP QTLEEEIKSC GLYRTKALNI INMSKILVER YGSQVPSDPD ELQKLPGVGR 

       130        140        150        160        170        180 
KTANVVVSNA FGRPAIAVDT HVFRVTHRLG LAKSSTPLGT EKELMACIPR VLWSQAHHWF 

       190        200        210 
IYHGRNVCRA RQPKCDECRL RQYCDFYNSE AGL

« Hide

References

[1]"The complete genome of Mahella australiensis DSM 15567."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Pagani I., Ivanova N., Teshima H., Brettin T., Detter J.C., Han C., Tapia R., Land M., Hauser L., Markowitz V. expand/collapse author list , Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., Pukall R., Steenblock K., Schneider S., Klenk H.-P., Eisen J.A.
Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 15567 / CIP 107919 / 50-1 BON.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002360 Genomic DNA. Translation: AEE97094.1.
RefSeqYP_004463916.1. NC_015520.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEE97094; AEE97094; Mahau_1918.
GeneID10608680.
KEGGmas:Mahau_1918.
PATRIC54632539. VBIMahAus157719_1958.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK10773.

Enzyme and pathway databases

BioCycMAUS697281:GH33-1964-MONOMER.

Family and domain databases

Gene3D1.10.1670.10. 1 hit.
1.10.340.30. 1 hit.
InterProIPR011257. DNA_glycosylase.
IPR004036. Endonuclease-III_CS2.
IPR005759. Endonuclease-III_Nth.
IPR003651. Endouclease3_FeS-loop_motif.
IPR003265. HhH-GPD_domain.
IPR000445. HhH_motif.
IPR003583. Hlx-hairpin-Hlx_DNA-bd_motif.
IPR023170. HTH_base_excis_C.
[Graphical view]
PfamPF00633. HHH. 1 hit.
PF00730. HhH-GPD. 1 hit.
[Graphical view]
PIRSFPIRSF001435. Nth. 1 hit.
SMARTSM00478. ENDO3c. 1 hit.
SM00525. FES. 1 hit.
SM00278. HhH1. 1 hit.
[Graphical view]
SUPFAMSSF48150. DNA_glycsylse. 1 hit.
TIGRFAMsTIGR01083. nth. 1 hit.
PROSITEPS01155. ENDONUCLEASE_III_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF4A1P4_MAHA5
AccessionPrimary (citable) accession number: F4A1P4
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: May 1, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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