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F3Z229 (F3Z229_DESAF) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length379 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188 HAMAP-Rule MF_01201

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site361Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2701Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1381Substrate By similarity HAMAP-Rule MF_01201
Binding site3181Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue361N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
F3Z229 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 34E28CAD3D35DD66

FASTA37941,014
        10         20         30         40         50         60 
MAITYNMLEV QVDLKRIVDN YRFMRSRAAR LMPVIKADAY GHGLLPVAKA LAAAGADAFC 

        70         80         90        100        110        120 
VGSVGEAVTL RRERKPDSGC RVVSLLGPMD REDYAEAVSH EVTLLVGRHE QLELLQVAAS 

       130        140        150        160        170        180 
SAGRMAPVAL KFDTGMSRLG FSEADVPRLI QTLTTSPNLR LELVTSHLAT ADEDSGVDYV 

       190        200        210        220        230        240 
LAQAERFRAI TAKLSAAGLR FQANLANSAG ILAYPELHFD LQRPGIALYG SNPFLGTNHE 

       250        260        270        280        290        300 
ELGRPLKQAM SVTTRILDVH DLPRGGTISY GRTYTAPRDM RVAIMAAGYA DGYSRGLSNK 

       310        320        330        340        350        360 
GQVCLKGSRA PILGRVCMQL TAVDITGRED VHPGDTVHLL GGSGRGYISV EELAGWWGTI 

       370 
SYESFCILGL NRRVYFGGD 

« Hide

References

[1]"Genome sequence of the mercury-methylating and pleomorphic Desulfovibrio africanus Strain Walvis Bay."
Brown S.D., Wall J.D., Kucken A.M., Gilmour C.C., Podar M., Brandt C.C., Teshima H., Detter J.C., Han C.S., Land M.L., Lucas S., Han J., Pennacchio L., Nolan M., Pitluck S., Woyke T., Goodwin L., Palumbo A.V., Elias D.A.
J. Bacteriol. 193:4037-4038(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Walvis Bay EMBL EGJ51238.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003221 Genomic DNA. Translation: EGJ51238.1.
RefSeqYP_005052897.1. NC_016629.1.

3D structure databases

ProteinModelPortalF3Z229.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEGJ51238; EGJ51238; Desaf_2930.
GeneID11566640.
KEGGdaf:Desaf_2930.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.

Enzyme and pathway databases

BioCycDAFR690850:GHYW-2978-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF3Z229_DESAF
AccessionPrimary (citable) accession number: F3Z229
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: February 19, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)