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F3YWZ8 (F3YWZ8_DESAF) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Superoxide dismutase RuleBase RU000414
EC=1.15.1.1 RuleBase RU000414
Gene names
ORF Names:Desaf_1043 EMBL EGJ49386.1
OrganismDesulfovibrio africanus str. Walvis Bay EMBL EGJ49386.1
Taxonomic identifier690850 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Deltaproteobacteria › Desulfovibrionales › Desulfovibrionaceae › Desulfovibrio ›

Protein attributes

Sequence length238 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3838 Potential EMBL EGJ49386.1
Chain39 – 238200 Potential EMBL EGJ49386.1
PRO_5000734115

Sequences

Sequence LengthMass (Da)Tools
F3YWZ8 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 28D1D4D569E57287

FASTA23826,888
        10         20         30         40         50         60 
MHTQSARLNR RRFLQTTAAA AALVGAAMAG WTPLVMAQGQ QKKEAFPMQP LPYPENALEP 

        70         80         90        100        110        120 
TISARTVSFH YGKHTKKYYD TTNEMVAGGK YAGMPLEEVV RAAHQEKNKK LFNNAAQAWN 

       130        140        150        160        170        180 
HTFYWNQFKP GGREFSGRAA DAIKSSFGGY EEFRDKFVKE AEGQFGSGYA WLVDNKGKLE 

       190        200        210        220        230 
IVTTPNAVNP LVQQQKPLLT VDVWEHAYYL DYQNKRGEHV KTVLDKLINW QVVAQNMA

« Hide

References

[1]"Genome sequence of the mercury-methylating and pleomorphic Desulfovibrio africanus Strain Walvis Bay."
Brown S.D., Wall J.D., Kucken A.M., Gilmour C.C., Podar M., Brandt C.C., Teshima H., Detter J.C., Han C.S., Land M.L., Lucas S., Han J., Pennacchio L., Nolan M., Pitluck S., Woyke T., Goodwin L., Palumbo A.V., Elias D.A.
J. Bacteriol. 193:4037-4038(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Walvis Bay EMBL EGJ49386.1.
[2]"Closure of Desulfovibrio africanus str. Walvis Bay."
Hurt R.A.Jr., Elias D.A., Land M.L., Brown S.D.
Submitted (FEB-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Walvis Bay EMBL EGJ49386.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003221 Genomic DNA. Translation: EGJ49386.1.
RefSeqYP_005051045.1. NC_016629.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEGJ49386; EGJ49386; Desaf_1043.
GeneID11568491.
KEGGdaf:Desaf_1043.

Phylogenomic databases

KOK04564.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
IPR006311. TAT_signal.
IPR019546. TAT_signal_bac_arc.
IPR019470. Ubiq_cytC_Rdtase_Fe-S_su_TAT.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
PF10399. UCR_Fe-S_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SODismutase. 1 hit.
SSF54719. SODismutase. 1 hit.
TIGRFAMsTIGR01409. TAT_signal_seq. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
PS51318. TAT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF3YWZ8_DESAF
AccessionPrimary (citable) accession number: F3YWZ8
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: May 1, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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