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Protein

Superoxide dismutase

Gene

Desaf_1043

Organism
Desulfovibrio africanus str. Walvis Bay
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Enzyme and pathway databases

BioCyciDAFR690850:GHYW-1057-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
ORF Names:Desaf_1043Imported
OrganismiDesulfovibrio africanus str. Walvis BayImported
Taxonomic identifieri690850 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
ProteomesiUP000007844 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3838 PotentialImportedAdd
BLAST
Chaini39 – 238200 PotentialImportedPRO_5000734115Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi690850.Desaf_1043.

Structurei

3D structure databases

ProteinModelPortaliF3YWZ8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Keywords - Domaini

SignalImported

Phylogenomic databases

KOiK04564.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
IPR006311. TAT_signal.
IPR019546. TAT_signal_bac_arc.
IPR019470. Ubiq_cytC_Rdtase_Fe-S_su_TAT.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
PF10399. UCR_Fe-S_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
TIGRFAMsiTIGR01409. TAT_signal_seq. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
PS51318. TAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

F3YWZ8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHTQSARLNR RRFLQTTAAA AALVGAAMAG WTPLVMAQGQ QKKEAFPMQP
60 70 80 90 100
LPYPENALEP TISARTVSFH YGKHTKKYYD TTNEMVAGGK YAGMPLEEVV
110 120 130 140 150
RAAHQEKNKK LFNNAAQAWN HTFYWNQFKP GGREFSGRAA DAIKSSFGGY
160 170 180 190 200
EEFRDKFVKE AEGQFGSGYA WLVDNKGKLE IVTTPNAVNP LVQQQKPLLT
210 220 230
VDVWEHAYYL DYQNKRGEHV KTVLDKLINW QVVAQNMA
Length:238
Mass (Da):26,888
Last modified:June 28, 2011 - v1
Checksum:i28D1D4D569E57287
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003221 Genomic DNA. Translation: EGJ49386.1.
RefSeqiWP_014259200.1. NC_016629.1.

Genome annotation databases

EnsemblBacteriaiEGJ49386; EGJ49386; Desaf_1043.
KEGGidaf:Desaf_1043.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003221 Genomic DNA. Translation: EGJ49386.1.
RefSeqiWP_014259200.1. NC_016629.1.

3D structure databases

ProteinModelPortaliF3YWZ8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi690850.Desaf_1043.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiEGJ49386; EGJ49386; Desaf_1043.
KEGGidaf:Desaf_1043.

Phylogenomic databases

KOiK04564.

Enzyme and pathway databases

BioCyciDAFR690850:GHYW-1057-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
IPR006311. TAT_signal.
IPR019546. TAT_signal_bac_arc.
IPR019470. Ubiq_cytC_Rdtase_Fe-S_su_TAT.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
PF10399. UCR_Fe-S_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
TIGRFAMsiTIGR01409. TAT_signal_seq. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
PS51318. TAT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Walvis BayImported.

Entry informationi

Entry nameiF3YWZ8_DESAF
AccessioniPrimary (citable) accession number: F3YWZ8
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: July 22, 2015
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.