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Protein
Submitted name:

Snf family helicase

Gene

PTSG_06661

Organism
Salpingoeca rosetta (strain ATCC 50818 / BSB-021)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionHelicaseImported, Hydrolase
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Snf family helicaseImported
Gene namesi
ORF Names:PTSG_06661Imported
OrganismiSalpingoeca rosetta (strain ATCC 50818 / BSB-021)Imported
Taxonomic identifieri946362 [NCBI]
Taxonomic lineageiEukaryotaChoanoflagellidaCraspedidaSalpingoecidaeSalpingoeca
Proteomesi
  • UP000007799 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini497 – 569HSAInterPro annotationAdd BLAST73
Domaini1067 – 1232Helicase ATP-bindingInterPro annotationAdd BLAST166
Domaini1629 – 1788Helicase C-terminalInterPro annotationAdd BLAST160
Domaini2210 – 2273Myb-likeInterPro annotationAdd BLAST64

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili871 – 900Sequence analysisAdd BLAST30
Coiled coili1847 – 1874Sequence analysisAdd BLAST28
Coiled coili2413 – 2436Sequence analysisAdd BLAST24

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

InParanoidiF2UFM5.
KOiK11320.

Family and domain databases

InterProiView protein in InterPro
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR009057. Homeobox-like.
IPR014012. HSA_dom.
IPR017877. Myb-like_dom.
IPR027417. P-loop_NTPase.
IPR001005. SANT/Myb.
IPR000330. SNF2_N.
PfamiView protein in Pfam
PF00271. Helicase_C. 1 hit.
PF07529. HSA. 1 hit.
PF00249. Myb_DNA-binding. 1 hit.
PF00176. SNF2_N. 1 hit.
SMARTiView protein in SMART
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SM00573. HSA. 1 hit.
SM00717. SANT. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF52540. SSF52540. 3 hits.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51204. HSA. 1 hit.
PS50090. MYB_LIKE. 1 hit.

Sequencei

Sequence statusi: Complete.

F2UFM5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADDTSKPAS APSTAATTTP AVAQQTGAQA ATTVPVDQPT TATGPTTTAA
60 70 80 90 100
STTAAPTPPS SATTPSITTT TPPAATAAPA ATAAPAATAM TTTLPQHTAQ
110 120 130 140 150
ANTTAVAQPS TSTPAPPASA PADNQQHTSA PVHPVQAGNA PATSNTPTPT
160 170 180 190 200
ATTATAATAS ETTATATPTV PATPTAATQP GDDAESARQG NASQAPKQEG
210 220 230 240 250
GEGEAGPVSV RARVKELLNL KLKVFLEAHE LRLRELFLVS TNNSLADLLH
260 270 280 290 300
ARTSGSPAME EFVARNRVDG VTTARTTAGK RKSSADSGQP TPKRATVGSR
310 320 330 340 350
SASPGGGASP RPGSPVTGGG GRGKGRGKGK SRARGKTPRS AGKAGKSSRA
360 370 380 390 400
GSALAEEDAL PEATPTAAVP ATGVATPKAR RAKAAAATAA ATTTTPTPGT
410 420 430 440 450
SLAAQRTPRT RSKAASVAVD AEKQPEQETA AVAAGKAGTQ AITTTGGAAP
460 470 480 490 500
TATSAAPKKM KLKVSLDEAA RLLHAEKELQ QRISEKRQQG VWVDKRLPKV
510 520 530 540 550
AEPARPKVHQ DYLLEEMAWL SDDFRMERKW KIAVARKLAR AVVRWHEARA
560 570 580 590 600
QEGRRRMRQE LNRKRKVAAN VARDVQVFWK QMLKVVDYKH KLELDAVKTD
610 620 630 640 650
AMNKHLDYLV GQTQSFTEDL TRGLQGKYAE YGKTAMAAHA RRAAAKHAAA
660 670 680 690 700
LQQATGQQIT LPPAPSQQQQ QQQQQGAPTQ VADSTTAAAG ASGDDGANKA
710 720 730 740 750
KGKAAKKQRS KRDAVKKEEE DEEYVPSDAE GKASASRGGD GEDEEGAGSG
760 770 780 790 800
EDDDDESSVD SADEPEDAEG ELADLAKGGE MPIEELLAMY QRMAEQEEGD
810 820 830 840 850
EGESNEEGGE EDEEDDDGGE EDEEGEEEEA ERQGKKAKKA AGKKGKGGRR
860 870 880 890 900
KKKQDAKEGG DEEEQEEDAG QNDKGEDEEE EEEEEEEAEE DEKEDEEEEE
910 920 930 940 950
PRTPRTRRSR RSRSSRTAAT AATAARGRGR GRRRSSRRRG AAVKQEEEEE
960 970 980 990 1000
EEEEEGETAG GEEGGQHDGA KSEAEGDGAG DAEEESGTDA ETADRETRQD
1010 1020 1030 1040 1050
LLLLAGKRQD ADGPSTRDEV EAVGRELETA QAVDATNTDT SNINTPVPFL
1060 1070 1080 1090 1100
LKCKLRPYQH IGLDWLATMH AKNLNGILAD EMGLGKTIQT IALLAHLAVT
1110 1120 1130 1140 1150
RNNWGPHLIV VPTSVMVNWE MELKKWCPAF KVLNYHGTIK ERREKRVGWT
1160 1170 1180 1190 1200
KPDQFHVCIT SYKLAVQDAH IFKRKKWKYL ILDEAHHIKN FESKRWQTLL
1210 1220 1230 1240 1250
RFTSRRRLLL TGTPLQNDLM ELWSLLHFLM PRVFQSHQQF REWFGNPVRE
1260 1270 1280 1290 1300
MVESTRAAKQ RDKERVSRLH KLLRPFILRR LKADVELQMP KKYEHVITCD
1310 1320 1330 1340 1350
LSRRQRELYD EFMSRTKTKE TIAAGNYLSV INILMQLRKV CNHPNLFAEP
1360 1370 1380 1390 1400
RVVSPLVLRP LRYEVPSLVI GALDDRDWFA AAPNPARVNL DLFGLALLHC
1410 1420 1430 1440 1450
ELRGDVSLHA DADAIRSLGL PVGFEIEREP PTEEEKNSGG ENYLDLLMRR
1460 1470 1480 1490 1500
RKQQRALLNH RAHINTLMCD RSAVYGDALR SAVTMPPRPV ASISTTALSS
1510 1520 1530 1540 1550
YLAPPTATTT TTTSSDNTAT TDTPNNTSNN AADPDILPLV QSVADRRAGL
1560 1570 1580 1590 1600
AAVVRRFSMA VEPARCPALD VAPTTVGGVR AVQKCMWSQP LRNRAARPTT
1610 1620 1630 1640 1650
TFQALVRDAA EEDRALVLPD RALIQYHCSK LQVLEKLLRE KKAGGHRVLI
1660 1670 1680 1690 1700
FTQMAKMLDI LEQFLAFHAF TYLRLDGSTP VVRRQQMTER FNRDSRLFCF
1710 1720 1730 1740 1750
ILSTRSGGLG VNLTGADTVV FYDSDWNPTM DAQAQDRAHR LGQTRDVHIY
1760 1770 1780 1790 1800
RLVCAKTVEE NILKKAQQKR QLGDIAIEGG AFTTEGLKSV KLMELFEGDS
1810 1820 1830 1840 1850
NVEDLGPVTG EDKKAKAATT AEAGAATDDG AATAGEGEEG FEQALLAAED
1860 1870 1880 1890 1900
ETDRQALQTA RQELSQELAE FDEDGTPVGS TSDTPKRKHP AAAAAAAAAT
1910 1920 1930 1940 1950
SSAAATPTRG SKRAKASAPT QQTAEGDMAE QEAGAAFTSP EHEQQQQQQQ
1960 1970 1980 1990 2000
QQQGRAGGAA RSDVETDEEE IDPAKLLEEQ MKRLRGVEHH ALNVLERYLS
2010 2020 2030 2040 2050
SQHERKLADA RRAMDEKHRA LCNLENRMRA GNDDGLSTEE EEELFYSEEK
2060 2070 2080 2090 2100
MQEALRAYME ATAQSEEAAS PLYGPPQPPA HGSSEAMAPH VETAHWAQYR
2110 2120 2130 2140 2150
VAFMHFVPAA PDLTKRRKRF RKKYKDLQRR ASRKGTNFMW QRTMDLGVRD
2160 2170 2180 2190 2200
ISEKRARELG EKALHHGRGI SASIFRRRDD KGGRYGIKMH RHPKRPVKSS
2210 2220 2230 2240 2250
GASKDKRDVD TNREAAPWTV EEDWTLLAAV RRHMCANSTV NWQLVADTMN
2260 2270 2280 2290 2300
VCTSFTGRPR TRLQCRDRYF NVLVNREDGR PPSKKKDDGK KKTKKKAKKE
2310 2320 2330 2340 2350
EPAKGQPVLT TQQLHEKDNR QSVIDFHRNV FTAIVKAHSS RAPAPPPPAA
2360 2370 2380 2390 2400
SEEARKSQQA ILDQARVGTE SVVELTQKLN DDYLKARSAA LMQRRQAHIQ
2410 2420 2430 2440 2450
AMKQAQAQNM PGRVAMQQQH QQQQQQQQQQ QQQQQQLRGV PSQQQQQQQQ
2460 2470 2480 2490 2500
QGRPGQPPAG MQQVVGVQNQ QLQPQQQPQQ HPQHTQHPQQ QAGVNTGRHG
2510 2520 2530 2540 2550
AISGQRASIP GVRPQGQAPG GTNGSGAYAQ SRAMPVGRAA GGGSVAQQQG
2560 2570 2580 2590 2600
RPLQQHPQQV PTSTMQQQRP MPMTSNPAQA RNMPSQGPAH TQQGQLRNVP
2610 2620 2630 2640 2650
ARMPQQQAQI YSQAPASRVQ GQMPVGQQQQ QQQPQQQQPR GGATTAPVGN
2660 2670 2680 2690 2700
VPRGPTGMVQ GGPSSSSQQT TPVRGAGTAP RQQQPLTHTS GAAGARGGVA
2710 2720 2730 2740 2750
GMSGQHQHQH QQQQQQQQPR GGVPVSRAMG QAPPSSSPQV MTQPAMPGPG
2760 2770 2780 2790 2800
GSTTAPTTGA YMPSARSTVG AGQPAPQYAR PAVAGQGIGT ASPHQAGTRY
2810 2820 2830 2840 2850
ATAPMSRVPA STSVYSTAST APHPHMGSPM ASSTGTIRPG GVRPMMGTAG
2860 2870 2880 2890 2900
ATGSMASTVP TTMITSVGAG VSGATVPTSL PYGSSTTSTV PGRAYAQQPQ
2910 2920 2930 2940 2950
QPGTYAYAPQ SAGSSKAHTP KQMSRRTSMS THAVPGSAYA TSSTAGPTGT
2960 2970 2980 2990 3000
AGAGAGGSGV QYNSASLLAY VRQHYSADPN FTYVVNVYND KTMSEEAKVT
3010 3020 3030 3040 3050
EIQRWLQTAQ TRSPARARTS SMGASSSSPH VMSRSASVSS TSRPMPQTQP
3060 3070 3080 3090
GGPPTMQQQQ PQQQTQPQQQ QQQLQQQQQP GAPYSTAPAS GYTRQGQS
Length:3,098
Mass (Da):334,828
Last modified:May 31, 2011 - v1
Checksum:iF1E9486FC1BFD1F9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL832972 Genomic DNA. Translation: EGD75593.1.
RefSeqiXP_004992050.1. XM_004991993.1.

Genome annotation databases

EnsemblProtistsiEGD75593; EGD75593; PTSG_06661.
GeneIDi16072609.
KEGGisre:PTSG_06661.

Entry informationi

Entry nameiF2UFM5_SALR5
AccessioniPrimary (citable) accession number: F2UFM5
Entry historyiIntegrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: June 7, 2017
This is version 31 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported