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F2RJG6 (F2RJG6_STRVP) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length571 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Sequences

Sequence LengthMass (Da)Tools
F2RJG6 [UniParc].

Last modified May 31, 2011. Version 1.
Checksum: 7562B37A17B91518

FASTA57160,665
        10         20         30         40         50         60 
MARKSVAAAL ALVAGAAAVA VTGNTAAQAT PPGEKDVTAV MFEWNFASVA RECTDRLGPA 

        70         80         90        100        110        120 
GYGYVQVSPP QEHLQGGQWW TSYQPVSYKI AGRLGDRTAF KKMIDTCHAA GVKVVADSVI 

       130        140        150        160        170        180 
NHMANGSGTG TGGTPFSKYD YPGLYSGADM DDCRATISTY QDRGNVQNCE LVQLPDLDTG 

       190        200        210        220        230        240 
EDHVRGKIAG YLNDLLSLGV DGFRVDAAKH MPAADLAAIK ARLSNPGAYW KQEAIFGAGE 

       250        260        270        280        290        300 
AVSPSEYLGN GDVQEFRYAR DLKRVLQNEK LAYLKNFGEA WGYMPSAQSG VFVDNHDTER 

       310        320        330        340        350        360 
GGDTLSYKDG ANYTLASVFM LAWPYGSPDV HSGYEWTDKD AGPPSGGQVN ACYTDGWKCQ 

       370        380        390        400        410        420 
HAWREISSMV AFRNTARGQA VTGWWDNGNN AIAFGRGSKA YVAINHETSA LTRTYQTSLP 

       430        440        450        460        470        480 
AGTYCDVQSN TPVTVNGSGQ FTATLGAHTA LALHVGAMNC GSGTTTPPPT TPPATPGASF 

       490        500        510        520        530        540 
NATATTVVGQ DIYVTGNRAE LGNWSPAAAL KLDPATYPVW KLTVGLPAGT AFEYKYLRKD 

       550        560        570 
AAGNVTWESG ANRTATVPAS GRIVLNDTFR S 

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References

[1]"Genome-wide analysis of the role of GlnR in Streptomyces venezuelae provides new insights into global nitrogen regulation in actinomycetes."
Pullan S.T., Chandra G., Bibb M.J., Merrick M.
BMC Genomics 12:175-175(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FR845719 Genomic DNA. Translation: CCA55176.1.
RefSeqYP_006877435.1. NC_018750.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCA55176; CCA55176; SVEN_1889.
GeneID13821013.
KEGGsve:SVEN_1889.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Enzyme and pathway databases

BioCycSVEN953739-WGS:GSXO-1902-MONOMER.

Family and domain databases

Gene3D2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEPS51166. CBM20. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF2RJG6_STRVP
AccessionPrimary (citable) accession number: F2RJG6
Entry history
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: July 9, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)