F2RGX5 (F2RGX5_STRVP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Beta-galactosidase RuleBase RU000675
EC=3.2.1.23 RuleBase RU000675

Gene names

Ordered Locus Names:

SVEN_1649 EMBL CCA54936.1

Organism

Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) [Complete proteome] [HAMAP] EMBL CCA54936.1

Taxonomic identifier

953739 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptomycineae › Streptomycetaceae › Streptomyces › Streptomyces venezuelae

Protein attributes

Sequence length	611 AA.
Sequence status	Fragment.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. RuleBase RU000675
Sequence similarities	Belongs to the glycosyl hydrolase 35 family. RuleBase RU003679

Ontologies

Keywords
Molecular function	Glycosidase RuleBase RU000675 EMBL CCA54936.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	beta-galactosidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	611	1	EMBL CCA54936.1

Sequences

	Sequence		Length	Mass (Da)
	F2RGX5 [UniParc]. Last modified May 31, 2011. Version 1. Checksum: 3E67AE0CE81D9A85	FASTA	611	65,783
	10 20 30 40 50 60 MSTFAVGDED FLLDGRPVRL LSGALHYFRV REEQWEHRLG MLRAMGLNCV ETYVPWNLHE 70 80 90 100 110 120 PEPGRYADVA ALGRFLDAVA RAGMWAIVRP GPYICAEWEN GGLPHWLTGP LGRRVRSFDP 130 140 150 160 170 180 EFLAPVEAWF RRLLPQVVER QIDRGGPVVL VQVENEYGSY GSDRAYLEWL AELLRGCGVA 190 200 210 220 230 240 VPLFTSDGPE DHMLTGGSVP GVLATANFGS GAREGFATLR RHQPSGPLMC MEFWCGWFDH 250 260 270 280 290 300 WGTEHAVRDA ADAAEALREI LECGASVNVY MAHGGTNFGG FAGANRAGEL HDGPLRATVT 310 320 330 340 350 360 SYDYDAPVDE AGRPTEKFWR FREVLAAYAE GPLPEVPEPP ARLAAPVSGG LDGWAPLEAV 370 380 390 400 410 420 LEVLGGEESV TPVPPVFEEL GVDRGLVRYR VAVPGPRQPY PLGVTGLRDR AVVYVDGVLA 430 440 450 460 470 480 GVLDTVDGED VSLSEPVAGP AVVDLWVESL GRVNYGPRQA EPKGITGGVR HERQYLHGVR 490 500 510 520 530 540 ARGLRLDAFE AAAVDKVPFG AGAGGPGLHR GTFEVAGAGD AWLRLPGGTR GFVWLNGFCL 550 560 570 580 590 600 GRYWPAAGPQ DALFVPGPVL REGANEVWVL ELEGAGGADG GAELSSVRAG SRDGSWLRTG 610 APGRSAPWSA Y

References

[1]

"Genome-wide analysis of the role of GlnR in Streptomyces venezuelae provides new insights into global nitrogen regulation in actinomycetes." Pullan S.T., Chandra G., Bibb M.J., Merrick M. BMC Genomics 12:175-175(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FR845719 Genomic DNA. Translation: CCA54936.1.
RefSeq	YP_006877195.1. NC_018750.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CCA54936; CCA54936; SVEN_1649.
GeneID	13820773.
KEGG	sve:SVEN_1649.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K12308.
Family and domain databases
Gene3D	2.60.120.260. 1 hit. 3.20.20.80. 1 hit.
InterPro	IPR026283. B-gal_1-like. IPR008979. Galactose-bd-like. IPR019801. Glyco_hydro_35_CS. IPR013781. Glyco_hydro_catalytic_dom. IPR001944. Glycoside_Hdrlase_35. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
PANTHER	PTHR23421. PTHR23421. 1 hit.
Pfam	PF01301. Glyco_hydro_35. 1 hit. [Graphical view]
PIRSF	PIRSF006336. B-gal. 1 hit.
PRINTS	PR00742. GLHYDRLASE35.
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS01182. GLYCOSYL_HYDROL_F35. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F2RGX5_STRVP

Accession

Primary (citable) accession number: F2RGX5

Entry history

Integrated into UniProtKB/TrEMBL:	May 31, 2011
Last sequence update:	May 31, 2011
Last modified:	May 29, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)