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F2REZ5

- F2REZ5_STRVP

UniProt

F2REZ5 - F2REZ5_STRVP

Protein
Submitted name:

ATP-dependent DNA ligase LigC

Gene

SVEN_6394

Organism
Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 12 (01 Oct 2014)
      Sequence version 1 (31 May 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSVEN953739-WGS:GSXO-6474-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligase LigCImported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:SVEN_6394Imported
    OrganismiStreptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745)Imported
    Taxonomic identifieri953739 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
    ProteomesiUP000006854: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F2REZ5-1 [UniParc]FASTAAdd to Basket

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    MPVSLGLADK SRIPDNRLMD LPVMPPVKPM LAKSVKRIPP GMQYEAKWDG    50
    FRAIVHRDGP ELVIGSRTGK PLTRYFPELV EALAARLPER CVVDGEIVIE 100
    HEGHLDFDRL SERIHPADSR VRMLAETTPA RFVAFDLLAL GDDALLDTPL 150
    SERRATLERV FAGVDAPVHL APATHDPELA ARWFDQYEGA GLDGVIAKPL 200
    DLPYRPDARL MYKIKHERTA DVVVAGYRFH KSGPVVGSLL LGLYDDKGAL 250
    QHVGVCAAFT ARRRAELIEE LEPLRMDPPD GHPWAAWAEE AAHAGARLPG 300
    APSRWSGKKD LSWVALRPER VCEVGYDHME GDRFRHTAQF KRWRPDRTPE 350
    SCGYGQLDEP VSYDLSEILG 370
    Length:370
    Mass (Da):41,317
    Last modified:May 31, 2011 - v1
    Checksum:iD2959DA4F63A10B9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FR845719 Genomic DNA. Translation: CCA59680.1.
    RefSeqiYP_006881939.1. NC_018750.1.

    Genome annotation databases

    EnsemblBacteriaiCCA59680; CCA59680; SVEN_6394.
    GeneIDi13820327.
    KEGGisve:SVEN_6394.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FR845719 Genomic DNA. Translation: CCA59680.1 .
    RefSeqi YP_006881939.1. NC_018750.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CCA59680 ; CCA59680 ; SVEN_6394 .
    GeneIDi 13820327.
    KEGGi sve:SVEN_6394.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci SVEN953739-WGS:GSXO-6474-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome-wide analysis of the role of GlnR in Streptomyces venezuelae provides new insights into global nitrogen regulation in actinomycetes."
      Pullan S.T., Chandra G., Bibb M.J., Merrick M.
      BMC Genomics 12:175-175(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745Imported.

    Entry informationi

    Entry nameiF2REZ5_STRVP
    AccessioniPrimary (citable) accession number: F2REZ5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 31, 2011
    Last sequence update: May 31, 2011
    Last modified: October 1, 2014
    This is version 12 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3