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F2REZ5 (F2REZ5_STRVP) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length370 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL CCA59680.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA ligation involved in DNA repair

Inferred from electronic annotation. Source: InterPro

DNA recombination

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F2REZ5 [UniParc].

Last modified May 31, 2011. Version 1.
Checksum: D2959DA4F63A10B9

FASTA37041,317
        10         20         30         40         50         60 
MPVSLGLADK SRIPDNRLMD LPVMPPVKPM LAKSVKRIPP GMQYEAKWDG FRAIVHRDGP 

        70         80         90        100        110        120 
ELVIGSRTGK PLTRYFPELV EALAARLPER CVVDGEIVIE HEGHLDFDRL SERIHPADSR 

       130        140        150        160        170        180 
VRMLAETTPA RFVAFDLLAL GDDALLDTPL SERRATLERV FAGVDAPVHL APATHDPELA 

       190        200        210        220        230        240 
ARWFDQYEGA GLDGVIAKPL DLPYRPDARL MYKIKHERTA DVVVAGYRFH KSGPVVGSLL 

       250        260        270        280        290        300 
LGLYDDKGAL QHVGVCAAFT ARRRAELIEE LEPLRMDPPD GHPWAAWAEE AAHAGARLPG 

       310        320        330        340        350        360 
APSRWSGKKD LSWVALRPER VCEVGYDHME GDRFRHTAQF KRWRPDRTPE SCGYGQLDEP 

       370 
VSYDLSEILG 

« Hide

References

[1]"Genome-wide analysis of the role of GlnR in Streptomyces venezuelae provides new insights into global nitrogen regulation in actinomycetes."
Pullan S.T., Chandra G., Bibb M.J., Merrick M.
BMC Genomics 12:175-175(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FR845719 Genomic DNA. Translation: CCA59680.1.
RefSeqYP_006881939.1. NC_018750.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCA59680; CCA59680; SVEN_6394.
GeneID13820327.
KEGGsve:SVEN_6394.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycSVEN953739-WGS:GSXO-6474-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF2REZ5_STRVP
AccessionPrimary (citable) accession number: F2REZ5
Entry history
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: July 9, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)