F2REZ5 (F2REZ5_STRVP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase LigC EMBL CCA59680.1
EC=6.5.1.1 EMBL CCA59680.1

Gene names

Ordered Locus Names:

SVEN_6394 EMBL CCA59680.1

Organism

Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) [Complete proteome] [HAMAP] EMBL CCA59680.1

Taxonomic identifier

953739 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptomycineae › Streptomycetaceae › Streptomyces › Streptomyces venezuelae

Protein attributes

Sequence length	370 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL CCA59680.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F2REZ5 [UniParc]. Last modified May 31, 2011. Version 1. Checksum: D2959DA4F63A10B9	FASTA	370	41,317
	10 20 30 40 50 60 MPVSLGLADK SRIPDNRLMD LPVMPPVKPM LAKSVKRIPP GMQYEAKWDG FRAIVHRDGP 70 80 90 100 110 120 ELVIGSRTGK PLTRYFPELV EALAARLPER CVVDGEIVIE HEGHLDFDRL SERIHPADSR 130 140 150 160 170 180 VRMLAETTPA RFVAFDLLAL GDDALLDTPL SERRATLERV FAGVDAPVHL APATHDPELA 190 200 210 220 230 240 ARWFDQYEGA GLDGVIAKPL DLPYRPDARL MYKIKHERTA DVVVAGYRFH KSGPVVGSLL 250 260 270 280 290 300 LGLYDDKGAL QHVGVCAAFT ARRRAELIEE LEPLRMDPPD GHPWAAWAEE AAHAGARLPG 310 320 330 340 350 360 APSRWSGKKD LSWVALRPER VCEVGYDHME GDRFRHTAQF KRWRPDRTPE SCGYGQLDEP 370 VSYDLSEILG

References

[1]

"Genome-wide analysis of the role of GlnR in Streptomyces venezuelae provides new insights into global nitrogen regulation in actinomycetes." Pullan S.T., Chandra G., Bibb M.J., Merrick M. BMC Genomics 12:175-175(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FR845719 Genomic DNA. Translation: CCA59680.1.
RefSeq	YP_006881939.1. NC_018750.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CCA59680; CCA59680; SVEN_6394.
GeneID	13820327.
KEGG	sve:SVEN_6394.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F2REZ5_STRVP

Accession

Primary (citable) accession number: F2REZ5

Entry history

Integrated into UniProtKB/TrEMBL:	May 31, 2011
Last sequence update:	May 31, 2011
Last modified:	April 3, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)