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Protein
Submitted name:

Uncharacterized protein

Gene

SVEN_5000

Organism
Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSVEN953739-WGS:GSXO-5070-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:SVEN_5000Imported
OrganismiStreptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745)Imported
Taxonomic identifieri953739 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
ProteomesiUP000006854 Componenti: Chromosome

Family & Domainsi

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F2R3R4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRAPDGIRG DHGAGAGAGA GVGAGVGSWG PSGAAGAGGP EGGGGAGPAR
60 70 80 90 100
NGGPGRASAA PAASARGPEG GSGDPADGPG PARDPGRAGR GPAAGRGGLV
110 120 130 140 150
VHPPVGVMRP RAADELPPQA APPRELQYSL KLDGFRALAF VLDDGKVVLQ
160 170 180 190 200
SRSRRDLAPE FPGIAAHLAD QLPPGVVLDG ELCAYRDGRL SFTDLLRSPA
210 220 230 240 250
DRARAGVPVS YIAFDLLAVP GRDVRGLPLR TRWELLGAAL SEAEPPLQRV
260 270 280 290 300
LATLDEETAR GWFRDLQDAG VEGIVAKTLS STYRAGSTWA WRKIRHTDTS
310 320 330 340 350
DGLLLGVVGP PGRPRSLLVR LADGRTVPTA PRLTPAQSRE VGALAGDRAG
360 370 380 390
PLVQDPEHGP VRWVDPPLPV ELRQLAVRQR QDYATFIRVR SEG
Length:393
Mass (Da):40,565
Last modified:May 31, 2011 - v1
Checksum:i6E18F1E73B580149
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR845719 Genomic DNA. Translation: CCA58286.1.
RefSeqiWP_015036185.1. NC_018750.1.
YP_006880545.1. NC_018750.1.

Genome annotation databases

EnsemblBacteriaiCCA58286; CCA58286; SVEN_5000.
KEGGisve:SVEN_5000.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR845719 Genomic DNA. Translation: CCA58286.1.
RefSeqiWP_015036185.1. NC_018750.1.
YP_006880545.1. NC_018750.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCA58286; CCA58286; SVEN_5000.
KEGGisve:SVEN_5000.

Enzyme and pathway databases

BioCyciSVEN953739-WGS:GSXO-5070-MONOMER.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome-wide analysis of the role of GlnR in Streptomyces venezuelae provides new insights into global nitrogen regulation in actinomycetes."
    Pullan S.T., Chandra G., Bibb M.J., Merrick M.
    BMC Genomics 12:175-175(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745Imported.

Entry informationi

Entry nameiF2R3R4_STRVP
AccessioniPrimary (citable) accession number: F2R3R4
Entry historyi
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: April 1, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.