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Protein

Superoxide dismutase

Gene

sodB

Organism
Photobacterium leiognathi subsp. mandapamensis svers.1.1.
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi27Divalent metal cationUniRule annotation1
Metal bindingi74Divalent metal cationUniRule annotation1
Metal bindingi158Divalent metal cationUniRule annotation1
Metal bindingi162Divalent metal cationUniRule annotation1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotation
LigandMetal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodBImported
ORF Names:PMSV_1450Imported
OrganismiPhotobacterium leiognathi subsp. mandapamensis svers.1.1.Imported
Taxonomic identifieri1001530 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaePhotobacterium
Proteomesi
  • UP000003966 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi1001530.PMSV_1450.

Structurei

3D structure databases

ProteinModelPortaliF2P9M7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 82Sod_Fe_NInterPro annotationAdd BLAST80
Domaini89 – 190Sod_Fe_CInterPro annotationAdd BLAST102

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CK4. Bacteria.
COG0605. LUCA.
OrthoDBiPOG091H03Q7.

Family and domain databases

Gene3Di1.10.287.990. 1 hit.
2.40.500.20. 1 hit.
InterProiView protein in InterPro
IPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
IPR036324. Mn/Fe_SOD_N_sf.
IPR036314. SOD_C_sf.
PfamiView protein in Pfam
PF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiView protein in PROSITE
PS00088. SOD_MN. 1 hit.

Sequencei

Sequence statusi: Complete.

F2P9M7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAFELPALPF AMNALEPHIS QETLEYHYGK HHNTYVVKLN GLVEGTELAE
60 70 80 90 100
KSLEEIIKTS TGGVFNNAAQ VWNHTFYWNC LAPNAGGEPT GEVAAAIEKA
110 120 130 140 150
FGSFAEFKAK FTDSAINNFG SSWTWLVKNA DGSLAIVNTS NAGCPITEEG
160 170 180 190
VTPLLTVDLW EHAYYIDYRN LRPSYMDGFW ALVNWDFVAK NLAA
Length:194
Mass (Da):21,458
Last modified:May 31, 2011 - v1
Checksum:i371E7A707488F661
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DF093596 Genomic DNA. Translation: GAA04648.1.
RefSeqiWP_008987568.1. NZ_DF093596.1.

Genome annotation databases

EnsemblBacteriaiGAA04648; GAA04648; PMSV_1450.
GeneIDi31589294.

Similar proteinsi

Entry informationi

Entry nameiF2P9M7_PHOLD
AccessioniPrimary (citable) accession number: F2P9M7
Entry historyiIntegrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: March 28, 2018
This is version 23 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported