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F2NRV5 (F2NRV5_TRES6) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length437 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-xylopyranose = D-xylulose. HAMAP-Rule MF_00455 RuleBase RU000609 SAAS SAAS001998

Cofactor

Binds 2 magnesium ions per subunit By similarity. HAMAP-Rule MF_00455

Subunit structure

Homotetramer By similarity. RuleBase RU000610 HAMAP-Rule MF_00455 SAAS SAAS001998

Subcellular location

Cytoplasm By similarity RuleBase RU000610 HAMAP-Rule MF_00455 SAAS SAAS001998.

Sequence similarities

Belongs to the xylose isomerase family. HAMAP-Rule MF_00455

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1001 By similarity HAMAP-Rule MF_00455
Active site1031 By similarity HAMAP-Rule MF_00455
Metal binding2311Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2671Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2671Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2701Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2951Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding3061Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3081Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3381Magnesium 1 By similarity HAMAP-Rule MF_00455

Sequences

Sequence LengthMass (Da)Tools
F2NRV5 [UniParc].

Last modified May 31, 2011. Version 1.
Checksum: 8AC37EE4E50936AF

FASTA43748,833
        10         20         30         40         50         60 
MSFFKGSKEY FPGIGQIKYE GPESKNPLAF KYYDAEKVVM GKKMKDWLKF TVAYWHSFCA 

        70         80         90        100        110        120 
DGGDPFGSGT REFTWKTPEE KVDAAFEFIT KLGCGYYAWH DRDICPEGTS PADSEKKLSH 

       130        140        150        160        170        180 
ITDLLLERQK ETGVKLLWGT ANVFNNPRYM NGAATNPDFD VVAQAASQIK AAIDNTIKLG 

       190        200        210        220        230        240 
GAGYTFWGGR EGYMSLLNTD MKAEKEHLAM MLTLARDYAR KQGFTGCFYI EPKPMEPTKH 

       250        260        270        280        290        300 
QYDYDSETVI GFLRAHGLDK DFKLNIEANH AELAGHEFAH ELTVCVDNGM LGSIDANRGD 

       310        320        330        340        350        360 
PVNGWDTDQF PVSIYETTQA MLQVIRMGGF TTGGLNFDAK VRRNSVAPED LFIAHIGGMD 

       370        380        390        400        410        420 
IFARGLEKAV QLIEDRRIPS MLKERYASFE TGNGKAFAEG KLTLDQVASL AKPYEQVAKT 

       430 
SGKQELYENI LNQICLG 

« Hide

References

[1]"The complete genome of chromosome of Treponema succinifaciens DSM 2489."
Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S., Peters L., Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G., Teshima H., Detter J.C., Tapia R., Han C., Land M., Hauser L., Markowitz V. expand/collapse author list , Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Gronow S., Wellnitz S., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 33096 / DSM 2489 / 6091.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002631 Genomic DNA. Translation: AEB14191.1.
RefSeqYP_004365488.1. NC_015385.1.

3D structure databases

ProteinModelPortalF2NRV5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEB14191; AEB14191; Tresu_1283.
GeneID10431398.
KEGGtsu:Tresu_1283.
PATRIC54429232. VBITreSuc166698_1349.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01805.
OMALFHAHIG.

Enzyme and pathway databases

BioCycTSUC869209:GHSS-1311-MONOMER.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
HAMAPMF_00455. Xylose_isom_A.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSPR00688. XYLOSISMRASE.
SUPFAMSSF51658. SSF51658. 1 hit.
TIGRFAMsTIGR02630. xylose_isom_A. 1 hit.
PROSITEPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF2NRV5_TRES6
AccessionPrimary (citable) accession number: F2NRV5
Entry history
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: June 11, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)