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F2NR08 (F2NR08_MARHT) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.2.4.2 EMBL AEB12586.1
Gene names
Ordered Locus Names:Marky_1855 EMBL AEB12586.1
OrganismMarinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) [Complete proteome] [HAMAP] EMBL AEB12586.1
Taxonomic identifier869210 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeMarinithermus

Protein attributes

Sequence length930 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
F2NR08 [UniParc].

Last modified May 31, 2011. Version 1.
Checksum: D1975B586CDEE580

FASTA930104,409
        10         20         30         40         50         60 
MARARDAQQW PETPNLLYIE ELYTTYQKDP TAVPPEWRQY FDALEHDLAR PVPAPPPRPA 

        70         80         90        100        110        120 
AQPAPRPAAA APSPAAMEAA GFQERVDELV EAYRELGHLA AQLDPLGSRR PEPAELDPAY 

       130        140        150        160        170        180 
YGFTEADLAR PVPEGIVPGV QLRTLGELVA HLRETYCRTI GVEFMHIDDS AARNWLIERM 

       190        200        210        220        230        240 
ESTANRTPLD AETRKRILAR LTEAAVFEEF VQKKYLGAKT FSLEGSETLI PLIDLAIEHA 

       250        260        270        280        290        300 
AERGVVEIVM AMAHRGRLNV LANIFKKPAR DIFLEFEEVF PEDYRGDVKY HLGYSSDHTT 

       310        320        330        340        350        360 
RTGKPVHLSL CFNPSHLEYI NTVALGRTRA KQDRFGDAAR TRGMALIVHG DAAFAGEGIV 

       370        380        390        400        410        420 
QETLNLSRLP AYEVGGTLHV IVNNQVGFTT SPEEGRSTLY ATDVAKMLQV PIFHVNGEDP 

       430        440        450        460        470        480 
EAVAHVVALA LEFRKTFHRD VVIDLYAFRR RGHNEADEPS FTQPLMYKAI ARHEPLYKRY 

       490        500        510        520        530        540 
RAQLVQEGVI REAEAEAIAR AYREHLEAEL EAAKREPTPP KPVGLGGIWN GYVGGLEKDV 

       550        560        570        580        590        600 
PDVDTGVKKR RLVEVLEGIT RVPQGFHLHP KLKRFMKQRE EMAQEKRPVD WATAEALAFG 

       610        620        630        640        650        660 
TLVTEGYRVR MSGQDSRRGT FSQRHAALYD YETGEPYIPL ANLAPDQAPF EIYNSPLSEA 

       670        680        690        700        710        720 
GVLGFEYGYS LDTPDGLVLW EAQFGDFVNV AQVIIDQFIA SAEAKWNRLS GLVMLLPHGL 

       730        740        750        760        770        780 
EGQGPEHSSA RLERFLMLAA ADNIQVTYPT TPAQYFHLLR RQVLRPWRKP LVVLTPKSLL 

       790        800        810        820        830        840 
RHPEATSPLE AFTQGRFRRV IPDAAANPEK VKKILLVSGK LYYELEAKRR AEGIEHVAIV 

       850        860        870        880        890        900 
RLEQLYPFPE AELEAALAPY KDGTPVVWVQ EEPVNMGAWP YLRMRFCQEI LGRFPLSGVS 

       910        920        930 
RPESASPATG SSRIHKLEQE RLLTEALKAE 

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References

[1]"Complete genome sequence of the aerobic, heterotroph Marinithermus hydrothermalis type strain (T1(T)) from a deep-sea hydrothermal vent chimney."
Copeland A., Gu W., Yasawong M., Lapidus A., Lucas S., Deshpande S., Pagani I., Tapia R., Cheng J.F., Goodwin L.A., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A., Palaniappan K. expand/collapse author list , Land M., Pan C., Brambilla E.M., Rohde M., Tindall B.J., Sikorski J., Goker M., Detter J.C., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P., Woyke T.
Stand. Genomic Sci. 6:21-30(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 14884 / JCM 11576 / T1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002630 Genomic DNA. Translation: AEB12586.1.
RefSeqYP_004368696.1. NC_015387.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEB12586; AEB12586; Marky_1855.
GeneID10434777.
KEGGmhd:Marky_1855.
PATRIC54436115. VBIMarHyd166763_1839.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00164.

Enzyme and pathway databases

BioCycMHYD869210:GHEE-1907-MONOMER.

Family and domain databases

Gene3D3.40.50.970. 2 hits.
InterProIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERPTHR23152. PTHR23152. 1 hit.
PfamPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMSSF52518. SSF52518. 2 hits.
TIGRFAMsTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF2NR08_MARHT
AccessionPrimary (citable) accession number: F2NR08
Entry history
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: June 11, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)