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F2NMG3 (F2NMG3_MARHT) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length201 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. HAMAP-Rule MF_00124 RuleBase RU000544 SAAS SAAS020634

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00124 SAAS SAAS020634

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00124 SAAS SAAS020634.

Sequence similarities

Belongs to the thymidine kinase family. HAMAP-Rule MF_00124

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding16 – 238ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding90 – 934ATP By similarity HAMAP-Rule MF_00124

Sites

Active site911Proton acceptor By similarity HAMAP-Rule MF_00124
Metal binding1471Zinc By similarity HAMAP-Rule MF_00124
Metal binding1501Zinc By similarity HAMAP-Rule MF_00124
Metal binding1851Zinc By similarity HAMAP-Rule MF_00124
Metal binding1881Zinc By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
F2NMG3 [UniParc].

Last modified May 31, 2011. Version 1.
Checksum: C1A165A3292AE1B2

FASTA20122,539
        10         20         30         40         50         60 
MPYLPWYPGW LEAIVGPMFS GKSEELIRRV KRALIAGQRV QVFKPRLDDR YHASDVVSHD 

        70         80         90        100        110        120 
GTRVEAVAVA DSRELRARLQ DPLPQVVAVD EVQFFDAGLV ELVMELTEQG VRVIVAGLDL 

       130        140        150        160        170        180 
DFRGEPFGII PELLARAEWV EKLSAVCPRC GRAATRTQRL INGQPARYDD PVILVGAHEV 

       190        200 
YEPRCRGCHT VVRENVPQQS S 

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References

[1]"Complete genome sequence of the aerobic, heterotroph Marinithermus hydrothermalis type strain (T1(T)) from a deep-sea hydrothermal vent chimney."
Copeland A., Gu W., Yasawong M., Lapidus A., Lucas S., Deshpande S., Pagani I., Tapia R., Cheng J.F., Goodwin L.A., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A., Palaniappan K. expand/collapse author list , Land M., Pan C., Brambilla E.M., Rohde M., Tindall B.J., Sikorski J., Goker M., Detter J.C., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P., Woyke T.
Stand. Genomic Sci. 6:21-30(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 14884 / JCM 11576 / T1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002630 Genomic DNA. Translation: AEB12133.1.
RefSeqYP_004368243.1. NC_015387.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEB12133; AEB12133; Marky_1398.
GeneID10434306.
KEGGmhd:Marky_1398.
PATRIC54435170. VBIMarHyd166763_1384.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00857.

Enzyme and pathway databases

BioCycMHYD869210:GHEE-1436-MONOMER.

Family and domain databases

HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020633. Thymidine_kinase_CS.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00603. TK_CELLULAR_TYPE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF2NMG3_MARHT
AccessionPrimary (citable) accession number: F2NMG3
Entry history
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: June 11, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)