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F2NL01 (F2NL01_MARHT) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118
Ordered Locus Names:Marky_0438 EMBL AEB11190.1, Marky_1728 EMBL AEB12463.1
OrganismMarinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) [Complete proteome] [HAMAP] EMBL AEB11190.1
Taxonomic identifier869210 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeMarinithermus

Protein attributes

Sequence length405 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding82 – 865GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding137 – 1404GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
F2NL01 [UniParc].

Last modified May 31, 2011. Version 1.
Checksum: C38BAC12793DB0BD

FASTA40544,541
        10         20         30         40         50         60 
MAKGVFERTK PHVNVGTIGH VDHGKTTLTA AITFAAAAMD PSVEVQDYDQ IDKAPEERAR 

        70         80         90        100        110        120 
GITINTAHVE YNTEKRHYSH VDCPGHADYV KNMITGAAQM DGAILVVSAA DGPMPQTREH 

       130        140        150        160        170        180 
ILLARQVGVP YIVVFLNKVD MVDDEELLEL VEMEVRELLS QYEFPGDEVP VIRGSALKAL 

       190        200        210        220        230        240 
EALHANPKTQ RGENEWVDKI WELLDAIDEY IPTPERDVDK PFLMPIEDVF TITGRGTVAT 

       250        260        270        280        290        300 
GRIERGKITV GEEVEIVGLG ETRRTVVTGL EMHRKTLSEG LAGDNVGALL RGVGRDEVER 

       310        320        330        340        350        360 
GQVLAKPGSI TPHTKFEAQV YVLKKEEGGR HTGFFSGYRP QFYFRTTDVT GVVTLPEGVE 

       370        380        390        400 
MVMPGDNVTF TVELIKPIAC EEGLRFAIRE GGRTVGAGVV TKILE 

« Hide

References

[1]"Complete genome sequence of the aerobic, heterotroph Marinithermus hydrothermalis type strain (T1(T)) from a deep-sea hydrothermal vent chimney."
Copeland A., Gu W., Yasawong M., Lapidus A., Lucas S., Deshpande S., Pagani I., Tapia R., Cheng J.F., Goodwin L.A., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A., Palaniappan K. expand/collapse author list , Land M., Pan C., Brambilla E.M., Rohde M., Tindall B.J., Sikorski J., Goker M., Detter J.C., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P., Woyke T.
Stand. Genomic Sci. 6:21-30(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 14884 EMBL AEB11190.1 and DSM 14884 / JCM 11576 / T1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002630 Genomic DNA. Translation: AEB11190.1.
CP002630 Genomic DNA. Translation: AEB12463.1.
RefSeqYP_004367300.1. NC_015387.1.
YP_004368573.1. NC_015387.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEB11190; AEB11190; Marky_0438.
AEB12463; AEB12463; Marky_1728.
GeneID10433331.
10434646.
KEGGmhd:Marky_0438.
mhd:Marky_1728.
PATRIC54433228. VBIMarHyd166763_0437.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.

Enzyme and pathway databases

BioCycMHYD869210:GHEE-1776-MONOMER.
MHYD869210:GHEE-461-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF2NL01_MARHT
AccessionPrimary (citable) accession number: F2NL01
Entry history
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: April 16, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)