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F2NCP5

- F2NCP5_DESAR

UniProt

F2NCP5 - F2NCP5_DESAR

Protein

Elongation factor Tu

Gene

tuf

Organism
Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 20 (01 Oct 2014)
      Sequence version 1 (31 May 2011)
      Previous versions | rss
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    Functioni

    This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi19 – 268GTPUniRule annotation
    Nucleotide bindingi81 – 855GTPUniRule annotation
    Nucleotide bindingi136 – 1394GTPUniRule annotation

    GO - Molecular functioni

    1. GTPase activity Source: InterPro
    2. GTP binding Source: UniProtKB-HAMAP
    3. translation elongation factor activity Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Elongation factorUniRule annotationImported

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    GTP-bindingUniRule annotation, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciDACE880072:GHK9-1480-MONOMER.
    DACE880072:GHK9-1494-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Elongation factor TuUniRule annotation
    Short name:
    EF-TuUniRule annotation
    Gene namesi
    Name:tufUniRule annotation
    Ordered Locus Names:Desac_1458Imported, Desac_1471Imported
    OrganismiDesulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2)Imported
    Taxonomic identifieri880072 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaSyntrophobacteralesSyntrophaceaeDesulfobacca
    ProteomesiUP000000483: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotation

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily.UniRule annotation
    Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

    Phylogenomic databases

    KOiK02358.
    OMAiDYAEIDG.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    HAMAPiMF_00118_B. EF_Tu_B.
    InterProiIPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view]
    PfamiPF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view]
    PRINTSiPR00315. ELONGATNFCT.
    SUPFAMiSSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEiPS00301. EFACTOR_GTP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F2NCP5-1 [UniParc]FASTAAdd to Basket

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    MAKKKFERKK PHVNIGTIGH IDHGKTTLTA AITKHLSLKG MAEYVPFDQI    50
    DKAPEEKERG ITIATAHVEY ETDNRHYAHV DCPGHADYIK NMITGAAQMD 100
    GAILVVGADD GPMPQTREHI LLARQVGVPY IVVFLNKVDM VDDPELIELV 150
    ELELRELLSK YDFPGDDIPI VKGSALKALE SDDPKSEAAA CIFELMKAVD 200
    GYIPEPVRDV DKPFLMPIED VFSISGRGTV VTGRVERGII KVQEEVEIVG 250
    FGPTFKTVCT GVEMFRKILD QGQAGDNIGI LLRGTKKDEV ERGQVVAKPG 300
    SITPHTKFKA EVYVLNKEEG GRHTPFFSGY RPQFYLRTTD VTGVVTLPEG 350
    VEMVMPGDNV AIEVHLITPV ALEKELRFAI REGGRTVGAG VVTEIVE 397
    Length:397
    Mass (Da):43,680
    Last modified:May 31, 2011 - v1
    Checksum:i0984DB67A9F5875D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002629 Genomic DNA. Translation: AEB09313.1.
    CP002629 Genomic DNA. Translation: AEB09326.1.
    RefSeqiYP_004370494.1. NC_015388.1.
    YP_004370507.1. NC_015388.1.

    Genome annotation databases

    EnsemblBacteriaiAEB09313; AEB09313; Desac_1458.
    AEB09326; AEB09326; Desac_1471.
    GeneIDi10436661.
    10436675.
    KEGGidao:Desac_1458.
    dao:Desac_1471.
    PATRICi54440137. VBIDesAce170587_1574.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002629 Genomic DNA. Translation: AEB09313.1 .
    CP002629 Genomic DNA. Translation: AEB09326.1 .
    RefSeqi YP_004370494.1. NC_015388.1.
    YP_004370507.1. NC_015388.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEB09313 ; AEB09313 ; Desac_1458 .
    AEB09326 ; AEB09326 ; Desac_1471 .
    GeneIDi 10436661.
    10436675.
    KEGGi dao:Desac_1458.
    dao:Desac_1471.
    PATRICi 54440137. VBIDesAce170587_1574.

    Phylogenomic databases

    KOi K02358.
    OMAi DYAEIDG.

    Enzyme and pathway databases

    BioCyci DACE880072:GHK9-1480-MONOMER.
    DACE880072:GHK9-1494-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    HAMAPi MF_00118_B. EF_Tu_B.
    InterProi IPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view ]
    Pfami PF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view ]
    PRINTSi PR00315. ELONGATNFCT.
    SUPFAMi SSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEi PS00301. EFACTOR_GTP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: DSM 11109Imported.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 700848 / DSM 11109 / ASRB2Imported and DSM 11109.

    Entry informationi

    Entry nameiF2NCP5_DESAR
    AccessioniPrimary (citable) accession number: F2NCP5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 31, 2011
    Last sequence update: May 31, 2011
    Last modified: October 1, 2014
    This is version 20 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3