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Protein

Elongation factor Tu

Gene

tuf

Organism
Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi19 – 268GTPUniRule annotation
Nucleotide bindingi81 – 855GTPUniRule annotation
Nucleotide bindingi136 – 1394GTPUniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Elongation factorUniRule annotationImported

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciDACE880072:GHK9-1480-MONOMER.
DACE880072:GHK9-1494-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Short name:
EF-TuUniRule annotation
Gene namesi
Name:tufUniRule annotation
Ordered Locus Names:Desac_1458Imported, Desac_1471Imported
OrganismiDesulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2)Imported
Taxonomic identifieri880072 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaSyntrophobacteralesSyntrophaceaeDesulfobacca
ProteomesiUP000000483 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi880072.Desac_1471.

Family & Domainsi

Sequence similaritiesi

Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

Phylogenomic databases

KOiK02358.
OMAiIKMTGEL.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR031157. G_TR_CS.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR000795. TF_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. G_TR_1. 1 hit.
PS51722. G_TR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F2NCP5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKKKFERKK PHVNIGTIGH IDHGKTTLTA AITKHLSLKG MAEYVPFDQI
60 70 80 90 100
DKAPEEKERG ITIATAHVEY ETDNRHYAHV DCPGHADYIK NMITGAAQMD
110 120 130 140 150
GAILVVGADD GPMPQTREHI LLARQVGVPY IVVFLNKVDM VDDPELIELV
160 170 180 190 200
ELELRELLSK YDFPGDDIPI VKGSALKALE SDDPKSEAAA CIFELMKAVD
210 220 230 240 250
GYIPEPVRDV DKPFLMPIED VFSISGRGTV VTGRVERGII KVQEEVEIVG
260 270 280 290 300
FGPTFKTVCT GVEMFRKILD QGQAGDNIGI LLRGTKKDEV ERGQVVAKPG
310 320 330 340 350
SITPHTKFKA EVYVLNKEEG GRHTPFFSGY RPQFYLRTTD VTGVVTLPEG
360 370 380 390
VEMVMPGDNV AIEVHLITPV ALEKELRFAI REGGRTVGAG VVTEIVE
Length:397
Mass (Da):43,680
Last modified:May 31, 2011 - v1
Checksum:i0984DB67A9F5875D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002629 Genomic DNA. Translation: AEB09313.1.
CP002629 Genomic DNA. Translation: AEB09326.1.
RefSeqiWP_013706424.1. NC_015388.1.

Genome annotation databases

EnsemblBacteriaiAEB09313; AEB09313; Desac_1458.
AEB09326; AEB09326; Desac_1471.
KEGGidao:Desac_1458.
dao:Desac_1471.
PATRICi54440137. VBIDesAce170587_1574.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002629 Genomic DNA. Translation: AEB09313.1.
CP002629 Genomic DNA. Translation: AEB09326.1.
RefSeqiWP_013706424.1. NC_015388.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi880072.Desac_1471.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEB09313; AEB09313; Desac_1458.
AEB09326; AEB09326; Desac_1471.
KEGGidao:Desac_1458.
dao:Desac_1471.
PATRICi54440137. VBIDesAce170587_1574.

Phylogenomic databases

KOiK02358.
OMAiIKMTGEL.

Enzyme and pathway databases

BioCyciDACE880072:GHK9-1480-MONOMER.
DACE880072:GHK9-1494-MONOMER.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR031157. G_TR_CS.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR000795. TF_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. G_TR_1. 1 hit.
PS51722. G_TR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DSM 11109Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700848 / DSM 11109 / ASRB2Imported and DSM 11109.

Entry informationi

Entry nameiF2NCP5_DESAR
AccessioniPrimary (citable) accession number: F2NCP5
Entry historyi
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: July 22, 2015
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.