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Protein
Submitted name:

DNA ligase D, 3'-phosphoesterase domain protein

Gene

Desac_0135

Organism
Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciDACE880072:GHK9-137-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase D, 3'-phosphoesterase domain proteinImported
Gene namesi
Ordered Locus Names:Desac_0135Imported
OrganismiDesulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2)Imported
Taxonomic identifieri880072 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaSyntrophobacteralesSyntrophaceaeDesulfobacca
ProteomesiUP000000483 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi880072.Desac_0135.

Family & Domainsi

Phylogenomic databases

OMAiKGWLFFK.

Family and domain databases

InterProiIPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.

Sequencei

Sequence statusi: Complete.

F2NBV5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQDDPLNTY RRKRDFAATA EPMGGTLDAG EAAPVFVIQK HAARRLHYDF
60 70 80 90 100
RLEVDGVLKS WAVPKGPSTN PQDKRLAAPT EDHPLEYATF EGVIPPGHYG
110 120 130 140 150
AGTVLVWDLG TYRNLTEKKG EAIPLPQALE HGHITVWLEG KKLRGAYSLT
160 170 180 190 200
RFKKGRDESW LLVKKNDAEA DASQDLLLTR PESVLSGRTI EEVAAANELL

SEELCSR
Length:207
Mass (Da):22,946
Last modified:May 31, 2011 - v1
Checksum:iA98E393D0CD3A302
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002629 Genomic DNA. Translation: AEB08032.1.
RefSeqiWP_013705145.1. NC_015388.1.

Genome annotation databases

EnsemblBacteriaiAEB08032; AEB08032; Desac_0135.
KEGGidao:Desac_0135.
PATRICi54437253. VBIDesAce170587_0150.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002629 Genomic DNA. Translation: AEB08032.1.
RefSeqiWP_013705145.1. NC_015388.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi880072.Desac_0135.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEB08032; AEB08032; Desac_0135.
KEGGidao:Desac_0135.
PATRICi54437253. VBIDesAce170587_0150.

Phylogenomic databases

OMAiKGWLFFK.

Enzyme and pathway databases

BioCyciDACE880072:GHK9-137-MONOMER.

Family and domain databases

InterProiIPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700848 / DSM 11109 / ASRB2Imported.

Entry informationi

Entry nameiF2NBV5_DESAR
AccessioniPrimary (citable) accession number: F2NBV5
Entry historyi
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: July 22, 2015
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.