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F2N5X7 (F2N5X7_PSEU6) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:PSTAA_3585 EMBL AEA85445.1
OrganismPseudomonas stutzeri (strain DSM 4166 / CMT.9.A) [Complete proteome] [HAMAP] EMBL AEA85445.1
Taxonomic identifier996285 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length553 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Molecular functionHydrolase EMBL AEA85445.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncation binding

Inferred from electronic annotation. Source: InterPro

hydrolase activity

Inferred from electronic annotation. Source: UniProtKB-KW

starch binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F2N5X7 [UniParc].

Last modified May 31, 2011. Version 1.
Checksum: 3EFEE65C5C3C55C9

FASTA55360,325
        10         20         30         40         50         60 
MSHILRAAVL AAVLLPFPAL ADQAGKSPAG VRYHGGDEII LQGFHWNVVR EAPNDWYNIL 

        70         80         90        100        110        120 
RQQASTIAAD GFSAIWMPVP WRDFSSWSEG GKSGGGEGYF WHDFNKNGRY GSDAQLRQAA 

       130        140        150        160        170        180 
GALGGAGVKV LYDVVPNHMN RGYPNKEINL PAGQGFWRND CADPGNYPND CDDGDRFVGG 

       190        200        210        220        230        240 
DADLNTGHPQ VYGMFRDEFA NLRSQYGAGG FRFDFVRGFA PERVNSWMTD SADNSFCVGE 

       250        260        270        280        290        300 
LWKGPSEYPS WDWRNTASWQ QIIKDWSDRA KCPVFDFALK ERMQNGSIAD WKNGLNGNPD 

       310        320        330        340        350        360 
PRWREVAVTF VDNHDTGYSP GQNGGQHHWP LQDGLIRQAY AYILTSPGTP VVYWSHMYDW 

       370        380        390        400        410        420 
GYRDFIRQLI QVRRAAGVRA DSAISFHSGY SGLVATVTGS QQTLVVALNS NLSNPGQVAS 

       430        440        450        460        470        480 
GSFSEAVNTS NGQVRVWRTG AGSGGGDNGG GEPGALVSVN FRCDNGVTQP GDSVYAVGNV 

       490        500        510        520        530        540 
SQLGNWSPAS AVRLTDTSGY PTWKGRISLP AGQNVEWKCL IRNEANATLV RQWQGGANNS 

       550 
VKPTEGATTA GRF 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of the nitrogen-fixing and rhizosphere-associated bacterium Pseudomonas stutzeri strain DSM4166."
Yu H., Yuan M., Lu W., Yang J., Dai S., Li Q., Yang Z., Dong J., Sun L., Deng Z., Zhang W., Chen M., Ping S., Han Y., Zhan Y., Yan Y., Jin Q., Lin M.
J. Bacteriol. 193:3422-3423(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 4166 / CMT.9.A.
[2]"Complete genome sequence of Pseudomonas stutzeri DSM4166."
Yu H., Yuan M., Yang J., Yan Y., Jin Q., Lin M.
Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DSM 4166.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002622 Genomic DNA. Translation: AEA85445.1.
RefSeqYP_005940187.1. NC_017532.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEA85445; AEA85445; PSTAA_3585.
GeneID12530732.
KEGGpsr:PSTAA_3585.
PATRIC54289001. VBIPseStu183391_3589.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Enzyme and pathway databases

BioCycPSTU996285:GLIZ-3588-MONOMER.

Family and domain databases

Gene3D2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015165. DUF1921.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF00686. CBM_20. 1 hit.
PF09081. DUF1921. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEPS51166. CBM20. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF2N5X7_PSEU6
AccessionPrimary (citable) accession number: F2N5X7
Entry history
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: October 16, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)