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F2N255 (F2N255_PSEU6) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length501 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F2N255 [UniParc].

Last modified May 31, 2011. Version 1.
Checksum: F88096A64E74112E

FASTA50156,058
        10         20         30         40         50         60 
MALEDYQRMR DFAATPEPAG KARPKSRKSQ ALQYCIQKHD ATRLHYDFRL ELDGTLKSWA 

        70         80         90        100        110        120 
IPKGPSLDPG VRRLAVHVED HPLEYATFEG NIPEGHYGAG DVIVWDRGVW TPQGDPQEGY 

       130        140        150        160        170        180 
RKGKLKFSLE GEKLAGSWNL VRTQMDGKKE QWFLIKSRDE AAREESEYDI VTAEPDSVLS 

       190        200        210        220        230        240 
DRTLVPRKRG AKARVAETPP APVKTPTKKR TPARRKAKVA LEGAVPAELP EHFKPQLATL 

       250        260        270        280        290        300 
VDTVPGGDWR YEIKFDGYRM LARIDAGEVR LFTRNGHDWT AKMPQQAAAL AGLGLESGWL 

       310        320        330        340        350        360 
DGEVVVPNEE GTPDFQALQN AFEAGRSGSI LYYLFDMPYL NGMDLREVAL EQRRAALREV 

       370        380        390        400        410        420 
LERSDSELLR FSEDFTEQPD SILESACQMK LEGLIGKRAG STYTSRRSSS WVKIKCSNRQ 

       430        440        450        460        470        480 
EFIIVGYTQP KGTRTGFGAL LLGLHDDNGE LRYAGKVGTG FNHATLQSLH KKLKKLEIDK 

       490        500 
SPLAKAPQQP MHVARSGSSR N 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of the nitrogen-fixing and rhizosphere-associated bacterium Pseudomonas stutzeri strain DSM4166."
Yu H., Yuan M., Lu W., Yang J., Dai S., Li Q., Yang Z., Dong J., Sun L., Deng Z., Zhang W., Chen M., Ping S., Han Y., Zhan Y., Yan Y., Jin Q., Lin M.
J. Bacteriol. 193:3422-3423(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 4166 / CMT.9.A.
[2]"Complete genome sequence of Pseudomonas stutzeri DSM4166."
Yu H., Yuan M., Yang J., Yan Y., Jin Q., Lin M.
Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DSM 4166.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002622 Genomic DNA. Translation: AEA84049.1.
RefSeqYP_005938791.1. NC_017532.1.

3D structure databases

ProteinModelPortalF2N255.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEA84049; AEA84049; PSTAA_2161.
GeneID12529304.
KEGGpsr:PSTAA_2161.
PATRIC54286071. VBIPseStu183391_2166.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycPSTU996285:GLIZ-2163-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF2N255_PSEU6
AccessionPrimary (citable) accession number: F2N255
Entry history
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: April 16, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)