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Protein
Submitted name:

Uncharacterized protein

Gene

PSTAA_2161

Organism
Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciPSTU996285:GLIZ-2163-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:PSTAA_2161Imported
OrganismiPseudomonas stutzeri (strain DSM 4166 / CMT.9.A)Imported
Taxonomic identifieri996285 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000000481: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF2N255.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F2N255-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MALEDYQRMR DFAATPEPAG KARPKSRKSQ ALQYCIQKHD ATRLHYDFRL
60 70 80 90 100
ELDGTLKSWA IPKGPSLDPG VRRLAVHVED HPLEYATFEG NIPEGHYGAG
110 120 130 140 150
DVIVWDRGVW TPQGDPQEGY RKGKLKFSLE GEKLAGSWNL VRTQMDGKKE
160 170 180 190 200
QWFLIKSRDE AAREESEYDI VTAEPDSVLS DRTLVPRKRG AKARVAETPP
210 220 230 240 250
APVKTPTKKR TPARRKAKVA LEGAVPAELP EHFKPQLATL VDTVPGGDWR
260 270 280 290 300
YEIKFDGYRM LARIDAGEVR LFTRNGHDWT AKMPQQAAAL AGLGLESGWL
310 320 330 340 350
DGEVVVPNEE GTPDFQALQN AFEAGRSGSI LYYLFDMPYL NGMDLREVAL
360 370 380 390 400
EQRRAALREV LERSDSELLR FSEDFTEQPD SILESACQMK LEGLIGKRAG
410 420 430 440 450
STYTSRRSSS WVKIKCSNRQ EFIIVGYTQP KGTRTGFGAL LLGLHDDNGE
460 470 480 490 500
LRYAGKVGTG FNHATLQSLH KKLKKLEIDK SPLAKAPQQP MHVARSGSSR

N
Length:501
Mass (Da):56,058
Last modified:May 31, 2011 - v1
Checksum:iF88096A64E74112E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002622 Genomic DNA. Translation: AEA84049.1.
RefSeqiWP_014596713.1. NC_017532.1.
YP_005938791.1. NC_017532.1.

Genome annotation databases

EnsemblBacteriaiAEA84049; AEA84049; PSTAA_2161.
GeneIDi12529304.
KEGGipsr:PSTAA_2161.
PATRICi54286071. VBIPseStu183391_2166.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002622 Genomic DNA. Translation: AEA84049.1.
RefSeqiWP_014596713.1. NC_017532.1.
YP_005938791.1. NC_017532.1.

3D structure databases

ProteinModelPortaliF2N255.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEA84049; AEA84049; PSTAA_2161.
GeneIDi12529304.
KEGGipsr:PSTAA_2161.
PATRICi54286071. VBIPseStu183391_2166.

Phylogenomic databases

KOiK01971.

Enzyme and pathway databases

BioCyciPSTU996285:GLIZ-2163-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of the nitrogen-fixing and rhizosphere-associated bacterium Pseudomonas stutzeri strain DSM4166."
    Yu H., Yuan M., Lu W., Yang J., Dai S., Li Q., Yang Z., Dong J., Sun L., Deng Z., Zhang W., Chen M., Ping S., Han Y., Zhan Y., Yan Y., Jin Q., Lin M.
    J. Bacteriol. 193:3422-3423(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 4166 / CMT.9.AImported.
  2. "Complete genome sequence of Pseudomonas stutzeri DSM4166."
    Yu H., Yuan M., Yang J., Yan Y., Jin Q., Lin M.
    Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DSM 4166.

Entry informationi

Entry nameiF2N255_PSEU6
AccessioniPrimary (citable) accession number: F2N255
Entry historyi
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: February 4, 2015
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.