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F2N255

- F2N255_PSEU6

UniProt

F2N255 - F2N255_PSEU6

Protein
Submitted name:

Uncharacterized protein

Gene

PSTAA_2161

Organism
Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (31 May 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Enzyme and pathway databases

    BioCyciPSTU996285:GLIZ-2163-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Ordered Locus Names:PSTAA_2161Imported
    OrganismiPseudomonas stutzeri (strain DSM 4166 / CMT.9.A)Imported
    Taxonomic identifieri996285 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000000481: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliF2N255.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F2N255-1 [UniParc]FASTAAdd to Basket

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    MALEDYQRMR DFAATPEPAG KARPKSRKSQ ALQYCIQKHD ATRLHYDFRL    50
    ELDGTLKSWA IPKGPSLDPG VRRLAVHVED HPLEYATFEG NIPEGHYGAG 100
    DVIVWDRGVW TPQGDPQEGY RKGKLKFSLE GEKLAGSWNL VRTQMDGKKE 150
    QWFLIKSRDE AAREESEYDI VTAEPDSVLS DRTLVPRKRG AKARVAETPP 200
    APVKTPTKKR TPARRKAKVA LEGAVPAELP EHFKPQLATL VDTVPGGDWR 250
    YEIKFDGYRM LARIDAGEVR LFTRNGHDWT AKMPQQAAAL AGLGLESGWL 300
    DGEVVVPNEE GTPDFQALQN AFEAGRSGSI LYYLFDMPYL NGMDLREVAL 350
    EQRRAALREV LERSDSELLR FSEDFTEQPD SILESACQMK LEGLIGKRAG 400
    STYTSRRSSS WVKIKCSNRQ EFIIVGYTQP KGTRTGFGAL LLGLHDDNGE 450
    LRYAGKVGTG FNHATLQSLH KKLKKLEIDK SPLAKAPQQP MHVARSGSSR 500
    N 501
    Length:501
    Mass (Da):56,058
    Last modified:May 31, 2011 - v1
    Checksum:iF88096A64E74112E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002622 Genomic DNA. Translation: AEA84049.1.
    RefSeqiYP_005938791.1. NC_017532.1.

    Genome annotation databases

    EnsemblBacteriaiAEA84049; AEA84049; PSTAA_2161.
    GeneIDi12529304.
    KEGGipsr:PSTAA_2161.
    PATRICi54286071. VBIPseStu183391_2166.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002622 Genomic DNA. Translation: AEA84049.1 .
    RefSeqi YP_005938791.1. NC_017532.1.

    3D structure databases

    ProteinModelPortali F2N255.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEA84049 ; AEA84049 ; PSTAA_2161 .
    GeneIDi 12529304.
    KEGGi psr:PSTAA_2161.
    PATRICi 54286071. VBIPseStu183391_2166.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci PSTU996285:GLIZ-2163-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the nitrogen-fixing and rhizosphere-associated bacterium Pseudomonas stutzeri strain DSM4166."
      Yu H., Yuan M., Lu W., Yang J., Dai S., Li Q., Yang Z., Dong J., Sun L., Deng Z., Zhang W., Chen M., Ping S., Han Y., Zhan Y., Yan Y., Jin Q., Lin M.
      J. Bacteriol. 193:3422-3423(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 4166 / CMT.9.AImported.
    2. "Complete genome sequence of Pseudomonas stutzeri DSM4166."
      Yu H., Yuan M., Yang J., Yan Y., Jin Q., Lin M.
      Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: DSM 4166.

    Entry informationi

    Entry nameiF2N255_PSEU6
    AccessioniPrimary (citable) accession number: F2N255
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 31, 2011
    Last sequence update: May 31, 2011
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3