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Protein
Submitted name:

Pseudomonas stutzeri DSM 4166, complete genome

Gene

PSTAA_0543

Organism
Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciPSTU996285:GLIZ-543-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Pseudomonas stutzeri DSM 4166, complete genomeImported
Gene namesi
Ordered Locus Names:PSTAA_0543Imported
OrganismiPseudomonas stutzeri (strain DSM 4166 / CMT.9.A)Imported
Taxonomic identifieri996285 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000000481 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF2MWP6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK05343.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

F2MWP6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRPLWYRNAV IYQIDPSLFR DSNGDGCGDL RGITERLDYI RGLGCTAIWL
60 70 80 90 100
MPFYQSPFED AGYDISDHLQ VAERFGDLAD IVALLEKAEE LGLHVIIELV
110 120 130 140 150
VQHTSSEHRW FQEARRDRDS PYRDYYIWAD EPDDAIEPIF PTVEDSVWTW
160 170 180 190 200
DEQAGQYYRH LFYKHEPDLD LTNPRVIHEI ERIMSFWLRL GVSGFRIDAA
210 220 230 240 250
VHMVRQAGGG DLRQGYWLLE HMRDFVTMRR PETVLLGEID TDPEKYIEYF
260 270 280 290 300
GDEADRVTLL LDFWVNNHLF LALARQQAEP LCRALNSQPL PPSHSQYALW
310 320 330 340 350
IRNHDELSLD RLEEDERNEV LDTFAPDQNM RAYNRGIRRR LAPMLDGDER
360 370 380 390 400
RIAATHALLF SLPGTPIIRY GEEIGMGDDL ERPERLAVRT PMQWSNEPNA
410 420 430 440 450
GFSCIDAQRL IAPVIDEGPF AFDRVNVFAQ TLRSDSLMAR TGNMIRTRIG
460 470 480 490 500
LREIGIGKRR TVEVDDPSVF AIRHDNDSTV LMLVNLADRE TTVTITDDDL
510 520 530 540
QDMVDVLADC DYGQPEGTPL QLRLGPYGYR WLRRKQQLFG
Length:540
Mass (Da):62,533
Last modified:May 31, 2011 - v1
Checksum:iD7C0CF0FF04C8559
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002622 Genomic DNA. Translation: AEA82463.1.
RefSeqiWP_011911723.1. NC_017532.1.
YP_005937205.1. NC_017532.1.

Genome annotation databases

EnsemblBacteriaiAEA82463; AEA82463; PSTAA_0543.
KEGGipsr:PSTAA_0543.
PATRICi54282750. VBIPseStu183391_0550.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002622 Genomic DNA. Translation: AEA82463.1.
RefSeqiWP_011911723.1. NC_017532.1.
YP_005937205.1. NC_017532.1.

3D structure databases

ProteinModelPortaliF2MWP6.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEA82463; AEA82463; PSTAA_0543.
KEGGipsr:PSTAA_0543.
PATRICi54282750. VBIPseStu183391_0550.

Phylogenomic databases

KOiK05343.

Enzyme and pathway databases

BioCyciPSTU996285:GLIZ-543-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of the nitrogen-fixing and rhizosphere-associated bacterium Pseudomonas stutzeri strain DSM4166."
    Yu H., Yuan M., Lu W., Yang J., Dai S., Li Q., Yang Z., Dong J., Sun L., Deng Z., Zhang W., Chen M., Ping S., Han Y., Zhan Y., Yan Y., Jin Q., Lin M.
    J. Bacteriol. 193:3422-3423(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 4166 / CMT.9.AImported.
  2. "Complete genome sequence of Pseudomonas stutzeri DSM4166."
    Yu H., Yuan M., Yang J., Yan Y., Jin Q., Lin M.
    Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DSM 4166.

Entry informationi

Entry nameiF2MWP6_PSEU6
AccessioniPrimary (citable) accession number: F2MWP6
Entry historyi
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: April 29, 2015
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.