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F2MK92 (F2MK92_LACCD) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length196 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. RuleBase RU000544 HAMAP-Rule MF_00124 SAAS SAAS020634

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00124 SAAS SAAS020633

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00124 SAAS SAAS020633.

Sequence similarities

Belongs to the thymidine kinase family. HAMAP-Rule MF_00124

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding9 – 168ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding85 – 884ATP By similarity HAMAP-Rule MF_00124

Sites

Active site861Proton acceptor By similarity HAMAP-Rule MF_00124
Metal binding1431Zinc By similarity HAMAP-Rule MF_00124
Metal binding1461Zinc By similarity HAMAP-Rule MF_00124
Metal binding1801Zinc By similarity HAMAP-Rule MF_00124
Metal binding1831Zinc By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
F2MK92 [UniParc].

Last modified May 31, 2011. Version 1.
Checksum: 2AA4E69E19ACC6F9

FASTA19622,427
        10         20         30         40         50         60 
MAQLFFRYGA MNSGKSIEIL KVAHNYEEQN KRVILMTSAV DDRAGVGMIA SRIGLERTAI 

        70         80         90        100        110        120 
PITHETNLYD IIKATDPKAA CVLIDEAQFL QKHHIFEAAR VVDELHIPVM AFGLKNDFRN 

       130        140        150        160        170        180 
ELFEGSKYLL LYADKIEEMK TICWFCAKKA IMNLRIHDGQ PVYEGKQVLI GGNESYYPVC 

       190 
RHHYFHPPLK QIDPTD 

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References

[1]"Complete genome sequence of the probiotic strain Lactobacillus casei BD-II."
Ai L., Chen C., Zhou F., Wang L., Zhang H., Chen W., Guo B.
J. Bacteriol. 193:3160-3161(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BD-II EMBL AEA56850.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002618 Genomic DNA. Translation: AEA56850.1.
RefSeqYP_005859391.1. NC_017474.1.

3D structure databases

ProteinModelPortalF2MK92.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEA56850; AEA56850; LCBD_1353.
GeneID12467702.
KEGGlcs:LCBD_1353.
PATRIC54293407. VBILacCas184581_1332.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00857.

Enzyme and pathway databases

BioCycLCAS998820:GLF4-1404-MONOMER.

Family and domain databases

HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020633. Thymidine_kinase_CS.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00603. TK_CELLULAR_TYPE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF2MK92_LACCD
AccessionPrimary (citable) accession number: F2MK92
Entry history
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: April 16, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)