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F2LYS5 (F2LYS5_LACAL) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length199 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. RuleBase RU000544 HAMAP-Rule MF_00124 SAAS SAAS020634

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00124 SAAS SAAS020634

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00124 SAAS SAAS020634.

Sequence similarities

Belongs to the thymidine kinase family. HAMAP-Rule MF_00124

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding9 – 168ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding93 – 964ATP By similarity HAMAP-Rule MF_00124

Sites

Active site941Proton acceptor By similarity HAMAP-Rule MF_00124
Metal binding1511Zinc By similarity HAMAP-Rule MF_00124
Metal binding1541Zinc By similarity HAMAP-Rule MF_00124
Metal binding1881Zinc By similarity HAMAP-Rule MF_00124
Metal binding1911Zinc By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
F2LYS5 [UniParc].

Last modified May 31, 2011. Version 1.
Checksum: 9FB40612A8C96756

FASTA19922,576
        10         20         30         40         50         60 
MAQLFFRYGA MSSGKTIEIL KVAHNYEAQG RRIALMTSGL DNRSGVGTVA SRIGLHRKAI 

        70         80         90        100        110        120 
PITSEMNLFE YIKKMNDHDL ADGDGKLACV LIDEAQFLKR HHVLECAKIV DDFNIPVMTF 

       130        140        150        160        170        180 
GLKNDFQNHL FEGSENLLIF ADKIEEMKTI CHYCGHKATM NLRVNNGKPV YEGEQVQIGG 

       190 
DESYYPVCRY HYFHPGSKR 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of Lactobacillus amylovorus GRL1118, isolated from pig ileum."
Kant R., Paulin L., Alatalo E., de Vos W.M., Palva A.
J. Bacteriol. 193:3147-3148(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: GRL 1118.
[2]Kant R., Paulin L., Alatalo E., de Vos W.M., Palva A.
Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: GRL 1118.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002609 Genomic DNA. Translation: AEA31728.1.
RefSeqYP_005853733.1. NC_017470.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEA31728; AEA31728; LAB52_03790.
GeneID12461889.
KEGGlay:LAB52_03790.
PATRIC54149825. VBILacAmy156066_0748.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00857.

Enzyme and pathway databases

BioCycLAMY695562:GLF1-794-MONOMER.

Family and domain databases

HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020633. Thymidine_kinase_CS.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00603. TK_CELLULAR_TYPE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF2LYS5_LACAL
AccessionPrimary (citable) accession number: F2LYS5
Entry history
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: June 11, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)