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F2LXU4

- F2LXU4_HIPMA

UniProt

F2LXU4 - F2LXU4_HIPMA

Protein

Elongation factor Tu

Gene

tuf

Organism
Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 20 (01 Oct 2014)
      Sequence version 1 (31 May 2011)
      Previous versions | rss
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    Functioni

    This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi19 – 268GTPUniRule annotation
    Nucleotide bindingi81 – 855GTPUniRule annotation
    Nucleotide bindingi136 – 1394GTPUniRule annotation

    GO - Molecular functioni

    1. GTPase activity Source: InterPro
    2. GTP binding Source: UniProtKB-HAMAP
    3. translation elongation factor activity Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Elongation factorUniRule annotationImported

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    GTP-bindingUniRule annotation, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciHMAR760142:GHVE-1424-MONOMER.
    HMAR760142:GHVE-1438-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Elongation factor TuUniRule annotation
    Short name:
    EF-TuUniRule annotation
    Gene namesi
    Name:tufUniRule annotation
    Ordered Locus Names:Hipma_1379Imported, Hipma_1392Imported
    OrganismiHippea maritima (strain ATCC 700847 / DSM 10411 / MH2)Imported
    Taxonomic identifieri760142 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfurellalesDesulfurellaceaeHippea
    ProteomesiUP000008139: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotation

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily.UniRule annotation
    Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

    Phylogenomic databases

    KOiK02358.
    OMAiGTEMCMP.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    HAMAPiMF_00118_B. EF_Tu_B.
    InterProiIPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view]
    PfamiPF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view]
    PRINTSiPR00315. ELONGATNFCT.
    SUPFAMiSSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEiPS00301. EFACTOR_GTP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F2LXU4-1 [UniParc]FASTAAdd to Basket

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    MAKEKYVRSK PHVNIGTIGH VDHGKTTLTA AITKVLAEKG KAEFKDYNEI    50
    DNAPEERERG VTINTAHVEY ETDKRHYAHV DCPGHADYIK NMITGAAQMD 100
    GAILVVSAAD GPMPQTREHI LLARQVNVPY IVVFLNKTDM VDDPELIDLV 150
    EMEVRELLSK YDFPGDDVPV IRGSALKALE GDPEAKKAIE ELMDAVDEYI 200
    PTPQREADKP FLMPIEDIFS ISGRGTVVTG RVERGVLKPG EEIEIVGFGE 250
    TRKTVATSLE MFRKILDEAI AGDNVGVLLR GIKKEEVERG MVLAKPGSIT 300
    PHKKFKAQVY VLTKDEGGRH TPFFEGYRPQ FYIRTTDVTG TVHLPEGVEM 350
    VMPGDNVELT VELIAPVALE KETRFAIREG GKTVGAGVIT EILE 394
    Length:394
    Mass (Da):43,542
    Last modified:May 31, 2011 - v1
    Checksum:iA7999C34D48A9388
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002606 Genomic DNA. Translation: AEA34335.1.
    CP002606 Genomic DNA. Translation: AEA34348.1.
    RefSeqiYP_004340394.1. NC_015318.1.
    YP_004340407.1. NC_015318.1.

    Genome annotation databases

    EnsemblBacteriaiAEA34335; AEA34335; Hipma_1379.
    AEA34348; AEA34348; Hipma_1392.
    GeneIDi10392732.
    10392746.
    KEGGihmr:Hipma_1379.
    hmr:Hipma_1392.
    PATRICi54413509. VBIHipMar155866_1405.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002606 Genomic DNA. Translation: AEA34335.1 .
    CP002606 Genomic DNA. Translation: AEA34348.1 .
    RefSeqi YP_004340394.1. NC_015318.1.
    YP_004340407.1. NC_015318.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEA34335 ; AEA34335 ; Hipma_1379 .
    AEA34348 ; AEA34348 ; Hipma_1392 .
    GeneIDi 10392732.
    10392746.
    KEGGi hmr:Hipma_1379.
    hmr:Hipma_1392.
    PATRICi 54413509. VBIHipMar155866_1405.

    Phylogenomic databases

    KOi K02358.
    OMAi GTEMCMP.

    Enzyme and pathway databases

    BioCyci HMAR760142:GHVE-1424-MONOMER.
    HMAR760142:GHVE-1438-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    HAMAPi MF_00118_B. EF_Tu_B.
    InterProi IPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view ]
    Pfami PF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view ]
    PRINTSi PR00315. ELONGATNFCT.
    SUPFAMi SSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEi PS00301. EFACTOR_GTP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the thermophilic sulfur-reducer Hippea maritima type strain (MH(2))."
      Neupane S., Hogberg N., Alstrom S., Lucas S., Han J., Lipudus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Lu M., Han C., Detter J.C., Tapia R., Fiebig A., Land M.
      , Hauser L., Krypides N.C., Ivanova N., Pagani I., Klenk H.-P., Woyke T., Finlay R.D.
      Stand. Genomic Sci. 4:303-311(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: DSM 10411Imported.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 700847 / DSM 10411 / MH2Imported and DSM 10411.

    Entry informationi

    Entry nameiF2LXU4_HIPMA
    AccessioniPrimary (citable) accession number: F2LXU4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 31, 2011
    Last sequence update: May 31, 2011
    Last modified: October 1, 2014
    This is version 20 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3