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F2LD61

- F2LD61_BURGS

UniProt

F2LD61 - F2LD61_BURGS

Protein
Submitted name:

DNA primase, small subunit

Gene

bgla_1g12430

Organism
Burkholderia gladioli (strain BSR3)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 21 (01 Oct 2014)
      Sequence version 1 (31 May 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro
    3. DNA primase activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Enzyme and pathway databases

    BioCyciBGLA999541:GHSQ-1271-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA primase, small subunitImported
    Gene namesi
    Ordered Locus Names:bgla_1g12430Imported
    OrganismiBurkholderia gladioli (strain BSR3)Imported
    Taxonomic identifieri999541 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
    ProteomesiUP000008316: Chromosome 1

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.
    OMAiVAFTEWT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F2LD61-1 [UniParc]FASTAAdd to Basket

    « Hide

    MASKLAEYQR KRRFDASPEP AGKRGAQARP RHDPERELHF VVQEHHARRL    50
    HYDFRLELDG VLKSWAVPKG PSTEPAEKRL AVHVEDHPLD YAGFEGEIPP 100
    GHYGAGSVRI DDQGVWRPDG GIAGARRGYR EGKLSFELDG HRLHGRWSLV 150
    RTHLPERNGK SSWLLIKARD EQAGPPGGER IKAARKQPAT AAAKRAGERA 200
    ETHGDKHAEK HVEKQAEKRG APPPRGKRAA DRAGRREALP ATLAPQLATL 250
    VAAPPEGEDW RYEMKFDGYR VLIRIAGRGR RRSVQVFTRE GKDWSAKFRR 300
    QCAALADLPV NNAWLDAEAV VLDARGLPDF GALQQALSAG EDAAIVFFVF 350
    DLPFLDGRAL ADLPLDTRRE RLAACFGGAG RQAVQLSPTL KGEPAELLAA 400
    ASRAGLEGLI GKRADSPYRA GRSASWIKLK CRQRQEFVIG GFSEPRGSRS 450
    GFGALLLGVH ERPAQGRRRA GGLAYVGRVG TGFDRRALDA IAARLRKIER 500
    GDAPFAVPPA ERGDAVHWVE PRLVAECEFA GWTADGLVRQ AAFIGLREDK 550
    PAGQIVRETA APAGGQPTGG RMRTDHQATG SRSRGKAANH ATGRNDDATV 600
    AGVRVTHPER VVDTESGLRK IDVVRYYAAI AEHLLPQLAG RPVSLVRYMK 650
    GIDGPSFFQK HAGPRGMGFV TRHPGLDPGH DALITLDDRE ALVGAAQFDA 700
    LEFHTWNACV DRIERPDRLV FDLDPDPALP WRAMIEAAQA LRALLDALGL 750
    PCFCKTSGGK GLHLVVPITR HASWDQARDF SQAVAQHLAG VAPERFSAKM 800
    GAQNRKGRIF VDYLRNGRGA STVAAWSARA RPGMGVSVPI DWDELPGTRG 850
    GAQWTIAEVP QRLASLRRDP WDGYEAARRR LTAAMRERLG KL 892
    Length:892
    Mass (Da):97,663
    Last modified:May 31, 2011 - v1
    Checksum:i14BA82267CFDD3D1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002599 Genomic DNA. Translation: AEA59920.1.
    RefSeqiWP_013697269.1. NC_015381.1.
    YP_004359876.1. NC_015381.1.

    Genome annotation databases

    EnsemblBacteriaiAEA59920; AEA59920; bgla_1g12430.
    GeneIDi10477740.
    KEGGibgd:bgla_1g12430.
    PATRICi54500578. VBIBurGla188977_4788.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002599 Genomic DNA. Translation: AEA59920.1 .
    RefSeqi WP_013697269.1. NC_015381.1.
    YP_004359876.1. NC_015381.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEA59920 ; AEA59920 ; bgla_1g12430 .
    GeneIDi 10477740.
    KEGGi bgd:bgla_1g12430.
    PATRICi 54500578. VBIBurGla188977_4788.

    Phylogenomic databases

    KOi K01971.
    OMAi VAFTEWT.

    Enzyme and pathway databases

    BioCyci BGLA999541:GHSQ-1271-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BSR3Imported.

    Entry informationi

    Entry nameiF2LD61_BURGS
    AccessioniPrimary (citable) accession number: F2LD61
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 31, 2011
    Last sequence update: May 31, 2011
    Last modified: October 1, 2014
    This is version 21 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3