F2LD61 (F2LD61_BURGS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA primase, small subunit EMBL AEA59920.1

Gene names

Ordered Locus Names:

bgla_1g12430 EMBL AEA59920.1

Organism

Burkholderia gladioli (strain BSR3) [Complete proteome] [HAMAP]

Taxonomic identifier

999541 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia gladioli

Protein attributes

Sequence length	892 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro DNA primase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F2LD61 [UniParc]. Last modified May 31, 2011. Version 1. Checksum: 14BA82267CFDD3D1	FASTA	892	97,663
	10 20 30 40 50 60 MASKLAEYQR KRRFDASPEP AGKRGAQARP RHDPERELHF VVQEHHARRL HYDFRLELDG 70 80 90 100 110 120 VLKSWAVPKG PSTEPAEKRL AVHVEDHPLD YAGFEGEIPP GHYGAGSVRI DDQGVWRPDG 130 140 150 160 170 180 GIAGARRGYR EGKLSFELDG HRLHGRWSLV RTHLPERNGK SSWLLIKARD EQAGPPGGER 190 200 210 220 230 240 IKAARKQPAT AAAKRAGERA ETHGDKHAEK HVEKQAEKRG APPPRGKRAA DRAGRREALP 250 260 270 280 290 300 ATLAPQLATL VAAPPEGEDW RYEMKFDGYR VLIRIAGRGR RRSVQVFTRE GKDWSAKFRR 310 320 330 340 350 360 QCAALADLPV NNAWLDAEAV VLDARGLPDF GALQQALSAG EDAAIVFFVF DLPFLDGRAL 370 380 390 400 410 420 ADLPLDTRRE RLAACFGGAG RQAVQLSPTL KGEPAELLAA ASRAGLEGLI GKRADSPYRA 430 440 450 460 470 480 GRSASWIKLK CRQRQEFVIG GFSEPRGSRS GFGALLLGVH ERPAQGRRRA GGLAYVGRVG 490 500 510 520 530 540 TGFDRRALDA IAARLRKIER GDAPFAVPPA ERGDAVHWVE PRLVAECEFA GWTADGLVRQ 550 560 570 580 590 600 AAFIGLREDK PAGQIVRETA APAGGQPTGG RMRTDHQATG SRSRGKAANH ATGRNDDATV 610 620 630 640 650 660 AGVRVTHPER VVDTESGLRK IDVVRYYAAI AEHLLPQLAG RPVSLVRYMK GIDGPSFFQK 670 680 690 700 710 720 HAGPRGMGFV TRHPGLDPGH DALITLDDRE ALVGAAQFDA LEFHTWNACV DRIERPDRLV 730 740 750 760 770 780 FDLDPDPALP WRAMIEAAQA LRALLDALGL PCFCKTSGGK GLHLVVPITR HASWDQARDF 790 800 810 820 830 840 SQAVAQHLAG VAPERFSAKM GAQNRKGRIF VDYLRNGRGA STVAAWSARA RPGMGVSVPI 850 860 870 880 890 DWDELPGTRG GAQWTIAEVP QRLASLRRDP WDGYEAARRR LTAAMRERLG KL

References

[1]

"Complete genome sequence of Burkholderia gladioli BSR3." Seo Y.S., Lim J., Choi B.S., Kim H., Goo E., Lee B., Lim J.S., Choi I.Y., Moon J.S., Kim J., Hwang I. J. Bacteriol. 193:3149-3149(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BSR3 EMBL AEA59920.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002599 Genomic DNA. Translation: AEA59920.1.
RefSeq	YP_004359876.1. NC_015381.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEA59920; AEA59920; bgla_1g12430.
GeneID	10477740.
KEGG	bgd:bgla_1g12430.
PATRIC	54500578. VBIBurGla188977_4788.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
Enzyme and pathway databases
BioCyc	BGLA999541:GHSQ-1821-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR014146. DNA_pol_LigD_ligase_dom. IPR002755. DNA_primase_S. IPR014144. LigD_PE_domain. IPR014145. LigD_pol. IPR012340. NA-bd_OB-fold. IPR014143. NHEJ_ligase_prk. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF01896. DNA_primase_S. 1 hit. PF13298. LigD_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR02777. LigD_PE_dom. 1 hit. TIGR02778. ligD_pol. 1 hit. TIGR02779. NHEJ_ligase_lig. 1 hit. TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F2LD61_BURGS

Accession

Primary (citable) accession number: F2LD61

Entry history

Integrated into UniProtKB/TrEMBL:	May 31, 2011
Last sequence update:	May 31, 2011
Last modified:	April 3, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)