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F2LC08

- F2LC08_BURGS

UniProt

F2LC08 - F2LC08_BURGS

Protein
Submitted name:

ATP dependent DNA ligase

Gene

bgla_1g09500

Organism
Burkholderia gladioli (strain BSR3)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (31 May 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciBGLA999541:GHSQ-971-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:bgla_1g09500Imported
    OrganismiBurkholderia gladioli (strain BSR3)Imported
    Taxonomic identifieri999541 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
    ProteomesiUP000008316: Chromosome 1

    Structurei

    3D structure databases

    ProteinModelPortaliF2LC08.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.
    OMAiGEFYPFQ.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F2LC08-1 [UniParc]FASTAAdd to Basket

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    MKRFAALYAA LDATTSTQVK LEALIAYFSA AEPEDAAWAS YFLAGGKPRQ    50
    SVPTRLLAQC ARDRAGLPDW LFEESYQAVG DLAETIAHVL PPATRASSLG 100
    LAQWIETRAL TLRGSEPEAL RERLVGYWDE LDWSERFLLT KLIGGGFRVG 150
    VSRQLVVRAL AAVAGVDHKR IAQRMVGWTD SRQAPDAGRY LRLIAAEPQG 200
    DAGAVAAATH ESDLGLPYPF FLAHPLQADP ATLGPIGDWL VEWKWDGIRA 250
    QLVKRAGRVW IWSRGEDLLT ERFPELAALG EALPDGTVVD GEILAWEPGA 300
    DTPLPFARLQ PRITRKSLSK RVLADSPAAL RAYDLLEEGG RDLRTEPLAR 350
    RRARLEALAE ALPAGESGVA LRVSPLVEAV DWPALAALRE QSRARGVEGL 400
    MLKQRASMYG VGRTKAAGTW WKWKIDPYAI DAVLLYAQRG HGRRASLYTD 450
    FTFAVWDEVD GVRTLVPFAK AYSGLTDEEM RQVDAIVRRT TIEKFGPVRS 500
    VTPSLVFEIG FEGIQASPRH KSGIAVRFPR MLRWRTDKSI EDADTLAMLK 550
    GFLDEAPA 558
    Length:558
    Mass (Da):61,539
    Last modified:May 31, 2011 - v1
    Checksum:i4E24A824FCC9E02D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002599 Genomic DNA. Translation: AEA59632.1.
    RefSeqiYP_004359588.1. NC_015381.1.

    Genome annotation databases

    EnsemblBacteriaiAEA59632; AEA59632; bgla_1g09500.
    GeneIDi10477440.
    KEGGibgd:bgla_1g09500.
    PATRICi54499972. VBIBurGla188977_4493.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002599 Genomic DNA. Translation: AEA59632.1 .
    RefSeqi YP_004359588.1. NC_015381.1.

    3D structure databases

    ProteinModelPortali F2LC08.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEA59632 ; AEA59632 ; bgla_1g09500 .
    GeneIDi 10477440.
    KEGGi bgd:bgla_1g09500.
    PATRICi 54499972. VBIBurGla188977_4493.

    Phylogenomic databases

    KOi K01971.
    OMAi GEFYPFQ.

    Enzyme and pathway databases

    BioCyci BGLA999541:GHSQ-971-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BSR3Imported.

    Entry informationi

    Entry nameiF2LC08_BURGS
    AccessioniPrimary (citable) accession number: F2LC08
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 31, 2011
    Last sequence update: May 31, 2011
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3