F2LC08 (F2LC08_BURGS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL AEA59632.1

Gene names

Ordered Locus Names:

bgla_1g09500 EMBL AEA59632.1

Organism

Burkholderia gladioli (strain BSR3) [Complete proteome] [HAMAP]

Taxonomic identifier

999541 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia gladioli

Protein attributes

Sequence length	558 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AEA59632.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F2LC08 [UniParc]. Last modified May 31, 2011. Version 1. Checksum: 4E24A824FCC9E02D	FASTA	558	61,539
	10 20 30 40 50 60 MKRFAALYAA LDATTSTQVK LEALIAYFSA AEPEDAAWAS YFLAGGKPRQ SVPTRLLAQC 70 80 90 100 110 120 ARDRAGLPDW LFEESYQAVG DLAETIAHVL PPATRASSLG LAQWIETRAL TLRGSEPEAL 130 140 150 160 170 180 RERLVGYWDE LDWSERFLLT KLIGGGFRVG VSRQLVVRAL AAVAGVDHKR IAQRMVGWTD 190 200 210 220 230 240 SRQAPDAGRY LRLIAAEPQG DAGAVAAATH ESDLGLPYPF FLAHPLQADP ATLGPIGDWL 250 260 270 280 290 300 VEWKWDGIRA QLVKRAGRVW IWSRGEDLLT ERFPELAALG EALPDGTVVD GEILAWEPGA 310 320 330 340 350 360 DTPLPFARLQ PRITRKSLSK RVLADSPAAL RAYDLLEEGG RDLRTEPLAR RRARLEALAE 370 380 390 400 410 420 ALPAGESGVA LRVSPLVEAV DWPALAALRE QSRARGVEGL MLKQRASMYG VGRTKAAGTW 430 440 450 460 470 480 WKWKIDPYAI DAVLLYAQRG HGRRASLYTD FTFAVWDEVD GVRTLVPFAK AYSGLTDEEM 490 500 510 520 530 540 RQVDAIVRRT TIEKFGPVRS VTPSLVFEIG FEGIQASPRH KSGIAVRFPR MLRWRTDKSI 550 EDADTLAMLK GFLDEAPA

References

[1]

"Complete genome sequence of Burkholderia gladioli BSR3." Seo Y.S., Lim J., Choi B.S., Kim H., Goo E., Lee B., Lim J.S., Choi I.Y., Moon J.S., Kim J., Hwang I. J. Bacteriol. 193:3149-3149(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BSR3 EMBL AEA59632.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002599 Genomic DNA. Translation: AEA59632.1.
RefSeq	YP_004359588.1. NC_015381.1.
3D structure databases
ProteinModelPortal	F2LC08.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEA59632; AEA59632; bgla_1g09500.
GeneID	10477440.
KEGG	bgd:bgla_1g09500.
PATRIC	54499972. VBIBurGla188977_4493.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
Enzyme and pathway databases
BioCyc	BGLA999541:GHSQ-1526-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F2LC08_BURGS

Accession

Primary (citable) accession number: F2LC08

Entry history

Integrated into UniProtKB/TrEMBL:	May 31, 2011
Last sequence update:	May 31, 2011
Last modified:	April 3, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)