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F2LC08

- F2LC08_BURGS

UniProt

F2LC08 - F2LC08_BURGS

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Protein
Submitted name: ATP dependent DNA ligase
Gene
bgla_1g09500
Organism
Burkholderia gladioli (strain BSR3)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBGLA999541:GHSQ-971-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:bgla_1g09500Imported
OrganismiBurkholderia gladioli (strain BSR3)Imported
Taxonomic identifieri999541 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
ProteomesiUP000008316: Chromosome 1

Structurei

3D structure databases

ProteinModelPortaliF2LC08.

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiGEFYPFQ.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F2LC08-1 [UniParc]FASTAAdd to Basket

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MKRFAALYAA LDATTSTQVK LEALIAYFSA AEPEDAAWAS YFLAGGKPRQ    50
SVPTRLLAQC ARDRAGLPDW LFEESYQAVG DLAETIAHVL PPATRASSLG 100
LAQWIETRAL TLRGSEPEAL RERLVGYWDE LDWSERFLLT KLIGGGFRVG 150
VSRQLVVRAL AAVAGVDHKR IAQRMVGWTD SRQAPDAGRY LRLIAAEPQG 200
DAGAVAAATH ESDLGLPYPF FLAHPLQADP ATLGPIGDWL VEWKWDGIRA 250
QLVKRAGRVW IWSRGEDLLT ERFPELAALG EALPDGTVVD GEILAWEPGA 300
DTPLPFARLQ PRITRKSLSK RVLADSPAAL RAYDLLEEGG RDLRTEPLAR 350
RRARLEALAE ALPAGESGVA LRVSPLVEAV DWPALAALRE QSRARGVEGL 400
MLKQRASMYG VGRTKAAGTW WKWKIDPYAI DAVLLYAQRG HGRRASLYTD 450
FTFAVWDEVD GVRTLVPFAK AYSGLTDEEM RQVDAIVRRT TIEKFGPVRS 500
VTPSLVFEIG FEGIQASPRH KSGIAVRFPR MLRWRTDKSI EDADTLAMLK 550
GFLDEAPA 558
Length:558
Mass (Da):61,539
Last modified:May 31, 2011 - v1
Checksum:i4E24A824FCC9E02D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002599 Genomic DNA. Translation: AEA59632.1.
RefSeqiYP_004359588.1. NC_015381.1.

Genome annotation databases

EnsemblBacteriaiAEA59632; AEA59632; bgla_1g09500.
GeneIDi10477440.
KEGGibgd:bgla_1g09500.
PATRICi54499972. VBIBurGla188977_4493.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002599 Genomic DNA. Translation: AEA59632.1 .
RefSeqi YP_004359588.1. NC_015381.1.

3D structure databases

ProteinModelPortali F2LC08.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEA59632 ; AEA59632 ; bgla_1g09500 .
GeneIDi 10477440.
KEGGi bgd:bgla_1g09500.
PATRICi 54499972. VBIBurGla188977_4493.

Phylogenomic databases

KOi K01971.
OMAi GEFYPFQ.

Enzyme and pathway databases

BioCyci BGLA999541:GHSQ-971-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BSR3Imported.

Entry informationi

Entry nameiF2LC08_BURGS
AccessioniPrimary (citable) accession number: F2LC08
Entry historyi
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: May 14, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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