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Protein
Submitted name:

ATP dependent DNA ligase

Gene

bgla_1g09500

Organism
Burkholderia gladioli (strain BSR3)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBGLA999541:GHSQ-971-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:bgla_1g09500Imported
OrganismiBurkholderia gladioli (strain BSR3)Imported
Taxonomic identifieri999541 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
ProteomesiUP000008316 Componenti: Chromosome 1

Structurei

3D structure databases

ProteinModelPortaliF2LC08.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK10747.
OMAiGQPYPFF.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F2LC08-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRFAALYAA LDATTSTQVK LEALIAYFSA AEPEDAAWAS YFLAGGKPRQ
60 70 80 90 100
SVPTRLLAQC ARDRAGLPDW LFEESYQAVG DLAETIAHVL PPATRASSLG
110 120 130 140 150
LAQWIETRAL TLRGSEPEAL RERLVGYWDE LDWSERFLLT KLIGGGFRVG
160 170 180 190 200
VSRQLVVRAL AAVAGVDHKR IAQRMVGWTD SRQAPDAGRY LRLIAAEPQG
210 220 230 240 250
DAGAVAAATH ESDLGLPYPF FLAHPLQADP ATLGPIGDWL VEWKWDGIRA
260 270 280 290 300
QLVKRAGRVW IWSRGEDLLT ERFPELAALG EALPDGTVVD GEILAWEPGA
310 320 330 340 350
DTPLPFARLQ PRITRKSLSK RVLADSPAAL RAYDLLEEGG RDLRTEPLAR
360 370 380 390 400
RRARLEALAE ALPAGESGVA LRVSPLVEAV DWPALAALRE QSRARGVEGL
410 420 430 440 450
MLKQRASMYG VGRTKAAGTW WKWKIDPYAI DAVLLYAQRG HGRRASLYTD
460 470 480 490 500
FTFAVWDEVD GVRTLVPFAK AYSGLTDEEM RQVDAIVRRT TIEKFGPVRS
510 520 530 540 550
VTPSLVFEIG FEGIQASPRH KSGIAVRFPR MLRWRTDKSI EDADTLAMLK

GFLDEAPA
Length:558
Mass (Da):61,539
Last modified:May 31, 2011 - v1
Checksum:i4E24A824FCC9E02D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002599 Genomic DNA. Translation: AEA59632.1.
RefSeqiWP_013696985.1. NC_015381.1.
YP_004359588.1. NC_015381.1.

Genome annotation databases

EnsemblBacteriaiAEA59632; AEA59632; bgla_1g09500.
KEGGibgd:bgla_1g09500.
PATRICi54499972. VBIBurGla188977_4493.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002599 Genomic DNA. Translation: AEA59632.1.
RefSeqiWP_013696985.1. NC_015381.1.
YP_004359588.1. NC_015381.1.

3D structure databases

ProteinModelPortaliF2LC08.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEA59632; AEA59632; bgla_1g09500.
KEGGibgd:bgla_1g09500.
PATRICi54499972. VBIBurGla188977_4493.

Phylogenomic databases

KOiK10747.
OMAiGQPYPFF.

Enzyme and pathway databases

BioCyciBGLA999541:GHSQ-971-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BSR3Imported.

Entry informationi

Entry nameiF2LC08_BURGS
AccessioniPrimary (citable) accession number: F2LC08
Entry historyi
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: May 27, 2015
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.