F2KY71 (F2KY71_PREDF) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL AEA21505.1
EC=5.1.1.1 EMBL AEA21505.1

Gene names

Name:	alr EMBL AEA21505.1
Ordered Locus Names:	HMPREF9137_2283 EMBL AEA21505.1

Organism

Prevotella denticola (strain F0289) [Complete proteome] [HAMAP]

Taxonomic identifier

767031 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Bacteroidia › Bacteroidales › Prevotellaceae › Prevotella › Prevotella denticola

Protein attributes

Sequence length	826 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. SAAS SAAS011079

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS011079
Molecular function	Isomerase SAAS SAAS011079 EMBL AEA21505.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	alanine metabolic process Inferred from electronic annotation. Source: InterPro biosynthetic process Inferred from electronic annotation. Source: InterPro cell division Inferred from electronic annotation. Source: InterPro regulation of cell shape Inferred from electronic annotation. Source: InterPro
Cellular_component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity Inferred from electronic annotation. Source: InterPro alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F2KY71 [UniParc]. Last modified May 31, 2011. Version 1. Checksum: 3B48D3F8F10375F1	FASTA	826	92,865
	10 20 30 40 50 60 MNYTIEKVTT LIGARRYGDK DADISFVLTD SRSLCFPEET LFFALKSERN DGHNYIPELY 70 80 90 100 110 120 GRGVRNFVVE TVPEDWNKRY PDSNFLKVVG SLEALQRLAE RHRDEYLIPV VGITGSNGKT 130 140 150 160 170 180 MVKEWLYQLL SPQMVVTRSP RSYNSQIGVP LSVLLLNENT QVGVFEAGIS QPGEMSALRD 190 200 210 220 230 240 IIQPTIGVFT CLGSAHQENF PSLEAKCKEK LHLFHDTQAI VYSLDDEVLN RCLDEYDYKG 250 260 270 280 290 300 EKLCWSAKDE KAVFYIKSIE KKDVETTVTY TWKNGKEAQY RLPFIDDASV ENSITCAVTA 310 320 330 340 350 360 LQLGVTPAAL GERMAQLEPV AMRLEVKEGQ HGCTLINDSY NSDFNSLDIA LDFMNRRPDH 370 380 390 400 410 420 KGRRRTLILS DILQSGDTDK DLYNKVAFLC EKRGVEKFIG IGEGLLGQRS AFRHLGKKHF 430 440 450 460 470 480 FATVNAFIHS DVFANLHDEV ILLKGARQFG FDRLTELLVK KVHETVLEVN LNAVVDNLNW 490 500 510 520 530 540 YRSFLKPETK LVCMIKADAY GAGAVEIAKT LQDHRVDYLA VAVADEGVTL RKNGITSNIM 550 560 570 580 590 600 IMNPEMSSFK TLFDYDLEPE VYCFRLLDAL VKAAQKEGIT GFPVHIKLDT GMHRLGFDPQ 610 620 630 640 650 660 KDMDELISRL KHQNAIIPRS VFSHFVGSDA DSFDGFSARQ FALFEEGSGK LQSAFKHKII 670 680 690 700 710 720 RHMDNSAGIE HFPERQMDMC RLGLGLYGIN PRTNKIINNV STLKTTILQL RHVPAGDTVG 730 740 750 760 770 780 YSRKGTIEHD SLIAAIPIGY ADGLNRHLGN RHCYCLVNGK KAAYVGNICM DVAMIDVTGI 790 800 810 820 DCKEGDSVEI FGDHLPVTVL SDVLDTIPYE VLTTVSNRVK RVYFQD

References

[1]	"Complete sequence of Prevotella denticola strain F0289." Durkin A.S., Madupu R., Radune D., Hostetler J., Torralba M., Gillis M., Methe B., Sutton G., Nelson K.E. Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: F0289.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002589 Genomic DNA. Translation: AEA21505.1.
RefSeq	YP_004329931.1. NC_015311.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEA21505; AEA21505; HMPREF9137_2283.
GeneID	10369642.
KEGG	pdn:HMPREF9137_2283.
PATRIC	54410162. VBIPreDen163057_2306.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01775.
Enzyme and pathway databases
BioCyc	PDEN767031:GHQS-1701-MONOMER.
Family and domain databases
Gene3D	2.40.37.10. 1 hit. 3.40.1190.10. 1 hit. 3.90.190.20. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR004101. Mur_ligase_C. IPR013221. Mur_ligase_cen. IPR000713. Mur_ligase_N. IPR005863. UDP-N-AcMur-pentapeptide_synth. [Graphical view]
PANTHER	PTHR23135:SF3. PTHR23135:SF3. 1 hit.
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. PF01225. Mur_ligase. 1 hit. PF08245. Mur_ligase_M. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF53244. Mur_ligase_C. 1 hit. SSF53623. Mur_ligase_cen. 1 hit. SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

F2KY71_PREDF

Accession

Primary (citable) accession number: F2KY71

Entry history

Integrated into UniProtKB/TrEMBL:	May 31, 2011
Last sequence update:	May 31, 2011
Last modified:	April 3, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)