F2KNL8 (F2KNL8_ARCVS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA polymerase LigD, ligase domain protein EMBL AEA46246.1

Gene names

Ordered Locus Names:

Arcve_0209

Organism

Archaeoglobus veneficus (strain DSM 11195 / SNP6) [Complete proteome] [HAMAP] EMBL AEA46246.1

Taxonomic identifier

693661 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Archaeoglobi › Archaeoglobales › Archaeoglobaceae › Archaeoglobus › Archaeoglobus veneficus

Protein attributes

Sequence length	324 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AEA46246.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F2KNL8 [UniParc]. Last modified May 31, 2011. Version 1. Checksum: C1A92EF1E303A35E	FASTA	324	37,620
	10 20 30 40 50 60 MEDWFNRKIK PMLAVRGKPF SSDDYIYEIK WDGTRCIAFV DVGKKRLRLQ NRRLIEIAYR 70 80 90 100 110 120 YPELDFFDFE SQNAVLDGEI VVFHNGKPSF PLLQQRDHVD SRLKIEILSK RIPAVYIAFD 130 140 150 160 170 180 VLYTASDGWI MNLPLVERKK ILDELAEEAR RVTKSEFIEG AGVEFYRKAI EMGLEGVMAK 190 200 210 220 230 240 RKNSTYQPGK RSAAWVKMKK RKTLDCIIVG WLEGEGVREG KFGSLVLALK SGDKLVHVGQ 250 260 270 280 290 300 VGTGFESDFI DWFYEKLKEI EISKPWFEAE FKRRVHWVKP VYVCEVEFLE VTEDGKLRAP 310 320 VFLRLRDDKG PDECTVEGLY GLVD

References

[1]

"The complete genome of Archaeoglobus veneficus SNP6." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Pagani I., Ivanova N., Mikhailova N., Lu M., Detter J.C., Tapia R., Han C., Land M., Hauser L., Markowitz V. , Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., Brambilla E., Klenk H.-P., Eisen J.A. Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SNP6.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002588 Genomic DNA. Translation: AEA46246.1.
RefSeq	YP_004340961.1. NC_015320.1.
3D structure databases
ProteinModelPortal	F2KNL8.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEA46246; AEA46246; Arcve_0209.
GeneID	10393301.
KEGG	ave:Arcve_0209.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
OMA	VEVKYGQ.
Enzyme and pathway databases
BioCyc	AVEN693661:GHD5-212-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR014146. DNA_pol_LigD_ligase_dom. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITE	PS00333. DNA_LIGASE_A2. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F2KNL8_ARCVS

Accession

Primary (citable) accession number: F2KNL8

Entry history

Integrated into UniProtKB/TrEMBL:	May 31, 2011
Last sequence update:	May 31, 2011
Last modified:	April 3, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)