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F2KNL8

- F2KNL8_ARCVS

UniProt

F2KNL8 - F2KNL8_ARCVS

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Protein
Submitted name: DNA polymerase LigD, ligase domain protein
Gene
Arcve_0209
Organism
Archaeoglobus veneficus (strain DSM 11195 / SNP6)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciAVEN693661:GHD5-212-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, ligase domain proteinImported
Gene namesi
Ordered Locus Names:Arcve_0209Imported
OrganismiArchaeoglobus veneficus (strain DSM 11195 / SNP6)Imported
Taxonomic identifieri693661 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaArchaeoglobiArchaeoglobalesArchaeoglobaceaeArchaeoglobus
ProteomesiUP000008136: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF2KNL8.

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiVEVKYGQ.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F2KNL8-1 [UniParc]FASTAAdd to Basket

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MEDWFNRKIK PMLAVRGKPF SSDDYIYEIK WDGTRCIAFV DVGKKRLRLQ    50
NRRLIEIAYR YPELDFFDFE SQNAVLDGEI VVFHNGKPSF PLLQQRDHVD 100
SRLKIEILSK RIPAVYIAFD VLYTASDGWI MNLPLVERKK ILDELAEEAR 150
RVTKSEFIEG AGVEFYRKAI EMGLEGVMAK RKNSTYQPGK RSAAWVKMKK 200
RKTLDCIIVG WLEGEGVREG KFGSLVLALK SGDKLVHVGQ VGTGFESDFI 250
DWFYEKLKEI EISKPWFEAE FKRRVHWVKP VYVCEVEFLE VTEDGKLRAP 300
VFLRLRDDKG PDECTVEGLY GLVD 324
Length:324
Mass (Da):37,620
Last modified:May 31, 2011 - v1
Checksum:iC1A92EF1E303A35E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002588 Genomic DNA. Translation: AEA46246.1.
RefSeqiYP_004340961.1. NC_015320.1.

Genome annotation databases

EnsemblBacteriaiAEA46246; AEA46246; Arcve_0209.
GeneIDi10393301.
KEGGiave:Arcve_0209.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002588 Genomic DNA. Translation: AEA46246.1 .
RefSeqi YP_004340961.1. NC_015320.1.

3D structure databases

ProteinModelPortali F2KNL8.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEA46246 ; AEA46246 ; Arcve_0209 .
GeneIDi 10393301.
KEGGi ave:Arcve_0209.

Phylogenomic databases

KOi K01971.
OMAi VEVKYGQ.

Enzyme and pathway databases

BioCyci AVEN693661:GHD5-212-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SNP6.

Entry informationi

Entry nameiF2KNL8_ARCVS
AccessioniPrimary (citable) accession number: F2KNL8
Entry historyi
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: October 16, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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