Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

F2KNL8

- F2KNL8_ARCVS

UniProt

F2KNL8 - F2KNL8_ARCVS

Protein
Submitted name:

DNA polymerase LigD, ligase domain protein

Gene

Arcve_0209

Organism
Archaeoglobus veneficus (strain DSM 11195 / SNP6)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 12 (01 Oct 2014)
      Sequence version 1 (31 May 2011)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciAVEN693661:GHD5-212-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA polymerase LigD, ligase domain proteinImported
    Gene namesi
    Ordered Locus Names:Arcve_0209Imported
    OrganismiArchaeoglobus veneficus (strain DSM 11195 / SNP6)Imported
    Taxonomic identifieri693661 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaArchaeoglobiArchaeoglobalesArchaeoglobaceaeArchaeoglobus
    ProteomesiUP000008136: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliF2KNL8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.
    OMAiVEVKYGQ.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F2KNL8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEDWFNRKIK PMLAVRGKPF SSDDYIYEIK WDGTRCIAFV DVGKKRLRLQ    50
    NRRLIEIAYR YPELDFFDFE SQNAVLDGEI VVFHNGKPSF PLLQQRDHVD 100
    SRLKIEILSK RIPAVYIAFD VLYTASDGWI MNLPLVERKK ILDELAEEAR 150
    RVTKSEFIEG AGVEFYRKAI EMGLEGVMAK RKNSTYQPGK RSAAWVKMKK 200
    RKTLDCIIVG WLEGEGVREG KFGSLVLALK SGDKLVHVGQ VGTGFESDFI 250
    DWFYEKLKEI EISKPWFEAE FKRRVHWVKP VYVCEVEFLE VTEDGKLRAP 300
    VFLRLRDDKG PDECTVEGLY GLVD 324
    Length:324
    Mass (Da):37,620
    Last modified:May 31, 2011 - v1
    Checksum:iC1A92EF1E303A35E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002588 Genomic DNA. Translation: AEA46246.1.
    RefSeqiYP_004340961.1. NC_015320.1.

    Genome annotation databases

    EnsemblBacteriaiAEA46246; AEA46246; Arcve_0209.
    GeneIDi10393301.
    KEGGiave:Arcve_0209.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002588 Genomic DNA. Translation: AEA46246.1 .
    RefSeqi YP_004340961.1. NC_015320.1.

    3D structure databases

    ProteinModelPortali F2KNL8.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEA46246 ; AEA46246 ; Arcve_0209 .
    GeneIDi 10393301.
    KEGGi ave:Arcve_0209.

    Phylogenomic databases

    KOi K01971.
    OMAi VEVKYGQ.

    Enzyme and pathway databases

    BioCyci AVEN693661:GHD5-212-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SNP6.

    Entry informationi

    Entry nameiF2KNL8_ARCVS
    AccessioniPrimary (citable) accession number: F2KNL8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 31, 2011
    Last sequence update: May 31, 2011
    Last modified: October 1, 2014
    This is version 12 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3