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Protein
Submitted name:

Putative ABC transporter, ATP-binding component

Gene

PSEBR_a3089

Organism
Pseudomonas brassicacearum (strain NFM421)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

TransportSAAS annotation

Keywords - Ligandi

ATP-bindingSAAS annotationImported, Nucleotide-binding

Enzyme and pathway databases

BioCyciPBRA994484:GJWC-3312-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ABC transporter, ATP-binding componentImported
Gene namesi
ORF Names:PSEBR_a3089Imported
OrganismiPseudomonas brassicacearum (strain NFM421)Imported
Taxonomic identifieri994484 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000006692 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Family & Domainsi

Sequence similaritiesi

Contains ABC transporter domain.SAAS annotation

Phylogenomic databases

KOiK10111.
OMAiVAKMLHI.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR008995. Mo/tungstate-bd_C_term_dom.
IPR012340. NA-bd_OB-fold.
IPR027417. P-loop_NTPase.
IPR013611. Transp-assoc_OB_typ2.
[Graphical view]
PfamiPF00005. ABC_tran. 1 hit.
PF08402. TOBE_2. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF50331. SSF50331. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F2KHW0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MANLKIKNLQ KGFEGFSIIK GIDLEVNDRE FVVFVGPSGC GKSTLLRLIA
60 70 80 90 100
GLEEVSDGTI ELDGRDITEV SPAKRDLAMV FQTYALYPHM SVRKNMSFAL
110 120 130 140 150
DLAGVPKAEV EKKVNEAARI LELGPMLERK PKQLSGGQRQ RVAIGRAIVR
160 170 180 190 200
NPKIFLFDEP LSNLDAALRV QMRLELARLH KELQATMIYV THDQVEAMTL
210 220 230 240 250
ADKVVVLNGG RIEQVGSPLE LYHQPANLFV AGFLGTPKMG FLKGKVTGLD
260 270 280 290 300
SQGCEVLLDA GTRISLPLSD ASLSVGGAVT LGIRPEHLNL AQPGDCTLQV
310 320 330 340 350
TADVSERLGS DTFCHVVTAS GEALTMRVRG DLASRFGEQL SLHLDAEHCH
360
LFDAEGVAVT RALRAAA
Length:367
Mass (Da):39,762
Last modified:May 31, 2011 - v1
Checksum:iD9E5C56478A69926
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002585 Genomic DNA. Translation: AEA69396.1.
RefSeqiWP_013693477.1. NC_015379.1.
YP_004354400.1. NC_015379.1.

Genome annotation databases

EnsemblBacteriaiAEA69396; AEA69396; PSEBR_a3089.
KEGGipba:PSEBR_a3089.
PATRICi54513862. VBIPseBra188168_3280.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002585 Genomic DNA. Translation: AEA69396.1.
RefSeqiWP_013693477.1. NC_015379.1.
YP_004354400.1. NC_015379.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEA69396; AEA69396; PSEBR_a3089.
KEGGipba:PSEBR_a3089.
PATRICi54513862. VBIPseBra188168_3280.

Phylogenomic databases

KOiK10111.
OMAiVAKMLHI.

Enzyme and pathway databases

BioCyciPBRA994484:GJWC-3312-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR008995. Mo/tungstate-bd_C_term_dom.
IPR012340. NA-bd_OB-fold.
IPR027417. P-loop_NTPase.
IPR013611. Transp-assoc_OB_typ2.
[Graphical view]
PfamiPF00005. ABC_tran. 1 hit.
PF08402. TOBE_2. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF50331. SSF50331. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of a beneficial plant root-associated bacterium, Pseudomonas brassicacearum."
    Ortet P., Barakat M., Lalaouna D., Fochesato S., Barbe V., Vacherie B., Santaella C., Heulin T., Achouak W.
    J. Bacteriol. 193:3146-3146(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NFM421Imported.
  2. "Complete Genome Sequence of a beneficial plant roots-associated bacterium Pseudomonas brassicacearum."
    Ortet P., Barakat M., Lalaouna D., Fochesato S., Barbe V., Santaella C., Heulin T., Achouak W.
    Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NFM421.

Entry informationi

Entry nameiF2KHW0_PSEBN
AccessioniPrimary (citable) accession number: F2KHW0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: June 24, 2015
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.