F2K8L8 (F2K8L8_PSEBN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative DNA ligase (ATP) (ATP-dependent DNA ligase) EMBL AEA67334.1

Gene names

ORF Names:

PSEBR_a1156 EMBL AEA67334.1

Organism

Pseudomonas brassicacearum (strain NFM421) [Complete proteome] [HAMAP] EMBL AEA67334.1

Taxonomic identifier

994484 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas brassicacearum › Pseudomonas brassicacearum

Protein attributes

Sequence length	562 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AEA67334.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F2K8L8 [UniParc]. Last modified May 31, 2011. Version 1. Checksum: A0B56CC68DFE280D	FASTA	562	62,874
	10 20 30 40 50 60 MKAFAELYAE LDATTSSNAK LAAMQAYFTK ASPQDAAWAV YFLSGGRPRQ LVPVKILREL 70 80 90 100 110 120 AVQVSGLSLW LFEESYQAVG DLAETISLVL PESPHSSDEG LALWIEEKLL PLRGESPEIL 130 140 150 160 170 180 AEQLPALWAQ LDRPSLMLCI KLITGSFRVG VSKLLVTRAL AGMANLDSKR VAQRLVGYTD 190 200 210 220 230 240 LSHRPTAASY LKLIAAESAD EHAQRGGQPY PFFLAHALSA PVEQFDTLLG PANDWQVEWK 250 260 270 280 290 300 WDGIRSQVIK RDGHLWVWSR GEELVTERFP ELHALAQVLP DGTVIDGEIV VWKTARPVTG 310 320 330 340 350 360 DAFDPDAPLQ PAVQPFALLQ QRIGRKTLGK KILEDAPVVV MAYDLLEWQG EDWRSRPQAE 370 380 390 400 410 420 RRERLEALIA SVHSPVLLPS PTVTGQDWFD LARQREASRR LGVEGMMLKA RNALYGVGRT 430 440 450 460 470 480 KDMGVWWKWK IDPFSVDAVL IYAQRGHGRR ASLYSDYTFA VWDNPPDSRE RTLVPFAKAY 490 500 510 520 530 540 SGLTDAEMRQ VDSIVRKTTV EKFGPVSSVT PTLVFELGFE GIALSNRHKS GIAVRFPRML 550 560 RWRQDKTVEE ADTLATLQDL LK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of a beneficial plant root-associated bacterium, Pseudomonas brassicacearum." Ortet P., Barakat M., Lalaouna D., Fochesato S., Barbe V., Vacherie B., Santaella C., Heulin T., Achouak W. J. Bacteriol. 193:3146-3146(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NFM421 EMBL AEA67334.1.
[2]	"Complete Genome Sequence of a beneficial plant roots-associated bacterium Pseudomonas brassicacearum." Ortet P., Barakat M., Lalaouna D., Fochesato S., Barbe V., Santaella C., Heulin T., Achouak W. Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: NFM421.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002585 Genomic DNA. Translation: AEA67334.1.
RefSeq	YP_004352338.1. NC_015379.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEA67334; AEA67334; PSEBR_a1156.
GeneID	10470050.
KEGG	pba:PSEBR_a1156.
PATRIC	54509710. VBIPseBra188168_1224.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
Enzyme and pathway databases
BioCyc	PBRA994484:GJWC-1241-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F2K8L8_PSEBN

Accession

Primary (citable) accession number: F2K8L8

Entry history

Integrated into UniProtKB/TrEMBL:	May 31, 2011
Last sequence update:	May 31, 2011
Last modified:	April 3, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)