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F2K2P6

- F2K2P6_MARM1

UniProt

F2K2P6 - F2K2P6_MARM1

Protein
Submitted name:

DNA ligase (ATP)

Gene

Marme_1930

Organism
Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (31 May 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMMED717774:GCPW-1981-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase (ATP)Imported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:Marme_1930Imported
    OrganismiMarinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1)Imported
    Taxonomic identifieri717774 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaOceanospirillalesMarinomonas
    ProteomesiUP000001062: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2121 PotentialImportedAdd
    BLAST
    Chaini22 – 275254 PotentialImportedPRO_5000728855Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliF2K2P6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    KOiK01971.
    OMAiGKGQFEN.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    F2K2P6-1 [UniParc]FASTAAdd to Basket

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    MKVSRLVGLM SLLLPCCLFA QDVQLAKVYR EGVPVSEYYV SEKYDGIRAI    50
    WNGHRLLTKN GHEIHAPDWF THDLPDVWLD GELWSNRNDY RFVASTVLDK 100
    TPEEAAWRKI TYMVFDAPDY SRPFSERWHI YGELVASLKL NHVQAVQQRE 150
    LESKEDLYIL LEEITNMDGE GLILHKKSAL FASGRSGNLL KFKRFEDAEA 200
    SVVSVLPGKG KFKNMMGALL VEMPTGQRFK IGTGFTNVQR MNPPRVGDRV 250
    TYKYFGFTGT GLPRFASFLR VRPQE 275
    Length:275
    Mass (Da):31,529
    Last modified:May 31, 2011 - v1
    Checksum:iE5E786F7383FC286
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002583 Genomic DNA. Translation: ADZ91179.1.
    RefSeqiWP_013661084.1. NC_015276.1.
    YP_004313015.1. NC_015276.1.

    Genome annotation databases

    EnsemblBacteriaiADZ91179; ADZ91179; Marme_1930.
    GeneIDi10336005.
    KEGGimme:Marme_1930.
    PATRICi47228666. VBIMarMed159599_1990.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002583 Genomic DNA. Translation: ADZ91179.1 .
    RefSeqi WP_013661084.1. NC_015276.1.
    YP_004313015.1. NC_015276.1.

    3D structure databases

    ProteinModelPortali F2K2P6.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADZ91179 ; ADZ91179 ; Marme_1930 .
    GeneIDi 10336005.
    KEGGi mme:Marme_1930.
    PATRICi 47228666. VBIMarMed159599_1990.

    Phylogenomic databases

    KOi K01971.
    OMAi GKGQFEN.

    Enzyme and pathway databases

    BioCyci MMED717774:GCPW-1981-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1Imported.

    Entry informationi

    Entry nameiF2K2P6_MARM1
    AccessioniPrimary (citable) accession number: F2K2P6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 31, 2011
    Last sequence update: May 31, 2011
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3