F2K2P6 (F2K2P6_MARM1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA ligase (ATP) EMBL ADZ91179.1
EC=6.5.1.1 EMBL ADZ91179.1

Gene names

Ordered Locus Names:

Marme_1930

Organism

Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) [Complete proteome] [HAMAP] EMBL ADZ91179.1

Taxonomic identifier

717774 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Oceanospirillales › Oceanospirillaceae › Marinomonas › Marinomonas mediterranea

Protein attributes

Sequence length	275 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ADZ91179.1
Molecular function	Ligase EMBL ADZ91179.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 21	21	Potential EMBL ADZ91179.1
	Chain	22 – 275	254	Potential EMBL ADZ91179.1		PRO_5000728855

Sequences

	Sequence		Length	Mass (Da)
	F2K2P6 [UniParc]. Last modified May 31, 2011. Version 1. Checksum: E5E786F7383FC286	FASTA	275	31,529
	10 20 30 40 50 60 MKVSRLVGLM SLLLPCCLFA QDVQLAKVYR EGVPVSEYYV SEKYDGIRAI WNGHRLLTKN 70 80 90 100 110 120 GHEIHAPDWF THDLPDVWLD GELWSNRNDY RFVASTVLDK TPEEAAWRKI TYMVFDAPDY 130 140 150 160 170 180 SRPFSERWHI YGELVASLKL NHVQAVQQRE LESKEDLYIL LEEITNMDGE GLILHKKSAL 190 200 210 220 230 240 FASGRSGNLL KFKRFEDAEA SVVSVLPGKG KFKNMMGALL VEMPTGQRFK IGTGFTNVQR 250 260 270 MNPPRVGDRV TYKYFGFTGT GLPRFASFLR VRPQE

References

[1]

"Complete sequence of Marinomonas mediterranea MMB-1." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Lucas-Elio P., Johnston A.W.B., Sanchez-Amat A., Woyke T. Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002583 Genomic DNA. Translation: ADZ91179.1.
RefSeq	YP_004313015.1. NC_015276.1.
3D structure databases
ProteinModelPortal	F2K2P6.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADZ91179; ADZ91179; Marme_1930.
GeneID	10336005.
KEGG	mme:Marme_1930.
PATRIC	47228666. VBIMarMed159599_1990.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

F2K2P6_MARM1

Accession

Primary (citable) accession number: F2K2P6

Entry history

Integrated into UniProtKB/TrEMBL:	May 31, 2011
Last sequence update:	May 31, 2011
Last modified:	April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)