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F2K2P6

- F2K2P6_MARM1

UniProt

F2K2P6 - F2K2P6_MARM1

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Protein
Submitted name: DNA ligase (ATP)
Gene
Marme_1930
Organism
Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMMED717774:GCPW-1981-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase (ATP)Imported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:Marme_1930Imported
OrganismiMarinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1)Imported
Taxonomic identifieri717774 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaOceanospirillalesMarinomonas
ProteomesiUP000001062: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2121 PredictedImported
Add
BLAST
Chaini22 – 275254 PredictedImported
PRO_5000728855Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliF2K2P6.

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

KOiK01971.
OMAiGKGQFEN.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

F2K2P6-1 [UniParc]FASTAAdd to Basket

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MKVSRLVGLM SLLLPCCLFA QDVQLAKVYR EGVPVSEYYV SEKYDGIRAI    50
WNGHRLLTKN GHEIHAPDWF THDLPDVWLD GELWSNRNDY RFVASTVLDK 100
TPEEAAWRKI TYMVFDAPDY SRPFSERWHI YGELVASLKL NHVQAVQQRE 150
LESKEDLYIL LEEITNMDGE GLILHKKSAL FASGRSGNLL KFKRFEDAEA 200
SVVSVLPGKG KFKNMMGALL VEMPTGQRFK IGTGFTNVQR MNPPRVGDRV 250
TYKYFGFTGT GLPRFASFLR VRPQE 275
Length:275
Mass (Da):31,529
Last modified:May 31, 2011 - v1
Checksum:iE5E786F7383FC286
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002583 Genomic DNA. Translation: ADZ91179.1.
RefSeqiWP_013661084.1. NC_015276.1.
YP_004313015.1. NC_015276.1.

Genome annotation databases

EnsemblBacteriaiADZ91179; ADZ91179; Marme_1930.
GeneIDi10336005.
KEGGimme:Marme_1930.
PATRICi47228666. VBIMarMed159599_1990.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002583 Genomic DNA. Translation: ADZ91179.1 .
RefSeqi WP_013661084.1. NC_015276.1.
YP_004313015.1. NC_015276.1.

3D structure databases

ProteinModelPortali F2K2P6.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADZ91179 ; ADZ91179 ; Marme_1930 .
GeneIDi 10336005.
KEGGi mme:Marme_1930.
PATRICi 47228666. VBIMarMed159599_1990.

Phylogenomic databases

KOi K01971.
OMAi GKGQFEN.

Enzyme and pathway databases

BioCyci MMED717774:GCPW-1981-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1.

Entry informationi

Entry nameiF2K2P6_MARM1
AccessioniPrimary (citable) accession number: F2K2P6
Entry historyi
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: September 3, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3