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F2K2P6 (F2K2P6_MARM1) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length275 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ADZ91179.1
   Molecular functionLigase EMBL ADZ91179.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2121 Potential EMBL ADZ91179.1
Chain22 – 275254 Potential EMBL ADZ91179.1
PRO_5000728855

Sequences

Sequence LengthMass (Da)Tools
F2K2P6 [UniParc].

Last modified May 31, 2011. Version 1.
Checksum: E5E786F7383FC286

FASTA27531,529
        10         20         30         40         50         60 
MKVSRLVGLM SLLLPCCLFA QDVQLAKVYR EGVPVSEYYV SEKYDGIRAI WNGHRLLTKN 

        70         80         90        100        110        120 
GHEIHAPDWF THDLPDVWLD GELWSNRNDY RFVASTVLDK TPEEAAWRKI TYMVFDAPDY 

       130        140        150        160        170        180 
SRPFSERWHI YGELVASLKL NHVQAVQQRE LESKEDLYIL LEEITNMDGE GLILHKKSAL 

       190        200        210        220        230        240 
FASGRSGNLL KFKRFEDAEA SVVSVLPGKG KFKNMMGALL VEMPTGQRFK IGTGFTNVQR 

       250        260        270 
MNPPRVGDRV TYKYFGFTGT GLPRFASFLR VRPQE 

« Hide

References

[1]"Complete sequence of Marinomonas mediterranea MMB-1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Lucas-Elio P., Johnston A.W.B., Sanchez-Amat A., Woyke T.
Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002583 Genomic DNA. Translation: ADZ91179.1.
RefSeqYP_004313015.1. NC_015276.1.

3D structure databases

ProteinModelPortalF2K2P6.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADZ91179; ADZ91179; Marme_1930.
GeneID10336005.
KEGGmme:Marme_1930.
PATRIC47228666. VBIMarMed159599_1990.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMAGKGQFEN.

Enzyme and pathway databases

BioCycMMED717774:GCPW-1981-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF2K2P6_MARM1
AccessionPrimary (citable) accession number: F2K2P6
Entry history
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: June 11, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)