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F2K2I7 (F2K2I7_MARM1) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length373 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201 SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site351Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2551Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1301Substrate By similarity HAMAP-Rule MF_01201
Binding site3031Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue351N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
F2K2I7 [UniParc].

Last modified May 31, 2011. Version 1.
Checksum: 2BDDB32F0D415BC3

FASTA37340,925
        10         20         30         40         50         60 
MARPLKAIID LEAIKINYQF SKKLHPTCKA LAVVKSDAYG HGAVDVATYL DDDVDAFAVA 

        70         80         90        100        110        120 
AIEEALQLRE ADVTSPILLL EGVFEQNEWP LCEELGFWCV IENTTQLDGL LNAQSKIEKV 

       130        140        150        160        170        180 
FVKLDTGMHR LGLNSLQVEH VVDTLKASGL VEEVVLMTHF SCADDLSSLE TIKQLTLFEE 

       190        200        210        220        230        240 
ANRTVGHLTT SVANSAAIMK WSVPEGGWIR PGIMLYGISP FVGVTGTQLG LKPAMQLVSK 

       250        260        270        280        290        300 
VISVRDVNIG DTVGYSQQYT AEHPHQIATV AVGYGDGYPR SSENGTPVAL SGDTAELAGR 

       310        320        330        340        350        360 
VSMDMITVKL SNQASSERPH QERKIQLGEE VELWGEQVPV EEVAYRSGTI GYELVTRMTQ 

       370 
RPMREYKTTK EQS

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References

[1]"Complete sequence of Marinomonas mediterranea MMB-1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Lucas-Elio P., Johnston A.W.B., Sanchez-Amat A., Woyke T.
Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002583 Genomic DNA. Translation: ADZ90032.1.
RefSeqYP_004311868.1. NC_015276.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADZ90032; ADZ90032; Marme_0749.
GeneID10334795.
KEGGmme:Marme_0749.
PATRIC47226165. VBIMarMed159599_0778.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.

Enzyme and pathway databases

BioCycMMED717774:GCPW-766-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF2K2I7_MARM1
AccessionPrimary (citable) accession number: F2K2I7
Entry history
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: May 29, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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