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F2K2I7

- F2K2I7_MARM1

UniProt

F2K2I7 - F2K2I7_MARM1

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Protein

Alanine racemase

Gene
Marme_0749
Organism
Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity.UniRule annotation

Catalytic activityi

L-alanine = D-alanine.UniRule annotationSAAS annotations

Cofactori

Pyridoxal phosphate By similarity.UniRule annotationSAAS annotations

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei35 – 351Proton acceptor; specific for D-alanine By similarityUniRule annotation
Binding sitei130 – 1301Substrate By similarityUniRule annotation
Active sitei255 – 2551Proton acceptor; specific for L-alanine By similarityUniRule annotation
Binding sitei303 – 3031Substrate; via amide nitrogen By similarityUniRule annotation

GO - Molecular functioni

  1. alanine racemase activity Source: UniProtKB-HAMAP
  2. pyridoxal phosphate binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-alanine biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciMMED717774:GCPW-766-MONOMER.
UniPathwayiUPA00042; UER00497.

Names & Taxonomyi

Protein namesi
Recommended name:
Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Marme_0749Imported
OrganismiMarinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1)Imported
Taxonomic identifieri717774 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaOceanospirillalesMarinomonas
ProteomesiUP000001062: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei35 – 351N6-(pyridoxal phosphate)lysine By similarityUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliF2K2I7.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK01775.
OMAiNIRADEM.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsiTIGR00492. alr. 1 hit.
PROSITEiPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F2K2I7-1 [UniParc]FASTAAdd to Basket

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MARPLKAIID LEAIKINYQF SKKLHPTCKA LAVVKSDAYG HGAVDVATYL    50
DDDVDAFAVA AIEEALQLRE ADVTSPILLL EGVFEQNEWP LCEELGFWCV 100
IENTTQLDGL LNAQSKIEKV FVKLDTGMHR LGLNSLQVEH VVDTLKASGL 150
VEEVVLMTHF SCADDLSSLE TIKQLTLFEE ANRTVGHLTT SVANSAAIMK 200
WSVPEGGWIR PGIMLYGISP FVGVTGTQLG LKPAMQLVSK VISVRDVNIG 250
DTVGYSQQYT AEHPHQIATV AVGYGDGYPR SSENGTPVAL SGDTAELAGR 300
VSMDMITVKL SNQASSERPH QERKIQLGEE VELWGEQVPV EEVAYRSGTI 350
GYELVTRMTQ RPMREYKTTK EQS 373
Length:373
Mass (Da):40,925
Last modified:May 31, 2011 - v1
Checksum:i2BDDB32F0D415BC3
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002583 Genomic DNA. Translation: ADZ90032.1.
RefSeqiYP_004311868.1. NC_015276.1.

Genome annotation databases

EnsemblBacteriaiADZ90032; ADZ90032; Marme_0749.
GeneIDi10334795.
KEGGimme:Marme_0749.
PATRICi47226165. VBIMarMed159599_0778.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002583 Genomic DNA. Translation: ADZ90032.1 .
RefSeqi YP_004311868.1. NC_015276.1.

3D structure databases

ProteinModelPortali F2K2I7.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADZ90032 ; ADZ90032 ; Marme_0749 .
GeneIDi 10334795.
KEGGi mme:Marme_0749.
PATRICi 47226165. VBIMarMed159599_0778.

Phylogenomic databases

KOi K01775.
OMAi NIRADEM.

Enzyme and pathway databases

UniPathwayi UPA00042 ; UER00497 .
BioCyci MMED717774:GCPW-766-MONOMER.

Family and domain databases

Gene3Di 2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPi MF_01201. Ala_racemase.
InterProi IPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view ]
PRINTSi PR00992. ALARACEMASE.
SMARTi SM01005. Ala_racemase_C. 1 hit.
[Graphical view ]
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsi TIGR00492. alr. 1 hit.
PROSITEi PS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1.

Entry informationi

Entry nameiF2K2I7_MARM1
AccessioniPrimary (citable) accession number: F2K2I7
Entry historyi
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: July 9, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi