F2JYZ4 (F2JYZ4_MARM1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribulose-bisphosphate carboxylase EMBL ADZ90859.1
EC=4.1.1.39 EMBL ADZ90859.1

Gene names

Ordered Locus Names:

Marme_1595

Organism

Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) [Complete proteome] [HAMAP] EMBL ADZ90859.1

Taxonomic identifier

717774 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Oceanospirillales › Oceanospirillaceae › Marinomonas › Marinomonas mediterranea

Protein attributes

Sequence length	406 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
Molecular function	Lyase EMBL ADZ90859.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbon fixation Inferred from electronic annotation. Source: InterPro
Molecular_function	magnesium ion binding Inferred from electronic annotation. Source: InterPro ribulose-bisphosphate carboxylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F2JYZ4 [UniParc]. Last modified May 31, 2011. Version 1. Checksum: DBFFCE2888E596A5	FASTA	406	44,735
	10 20 30 40 50 60 MDKFVVTYRV TSHRPLLLVA EKICNDQTTG TFTKIPELSD SGTHCFTAEI RSIDEGFDII 70 80 90 100 110 120 HQEYSGLIRI AFPEDLCGYD LSAIFTIACG GVSSIKIIKT LTIEDISFSP SFIEHFKGPK 130 140 150 160 170 180 FGIAGTLNKL GLTSGPIIGG ILKPNIGITP SDSADLVEQL VSANIDFIKD DEKLQSPPYS 190 200 210 220 230 240 HVKNRIDSIL PIIDKWQQKL GKKVIYAFNI CHSDLGEIER NHEYLVKQGG DAAVINVNQI 250 260 270 280 290 300 GICGLDTLNK YSEVILHAHT NGLAFNERSD WGISFHVWQK VWRLLGIDHL QINGIDGKYW 310 320 330 340 350 360 QDNDSVIEAF RSTVSPLGEL TPTLPVFCSG QWGGQVPETY RCTGQSTDLM YLGGGGIHGH 370 380 390 400 PMGAVGGVKA IRQAWDASLK DQSLEQYALT HPELAQAITF FSQKNK

References

[1]

"Complete sequence of Marinomonas mediterranea MMB-1." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Lucas-Elio P., Johnston A.W.B., Sanchez-Amat A., Woyke T. Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002583 Genomic DNA. Translation: ADZ90859.1.
RefSeq	YP_004312695.1. NC_015276.1.
3D structure databases
ProteinModelPortal	F2JYZ4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADZ90859; ADZ90859; Marme_1595.
GeneID	10335669.
KEGG	mme:Marme_1595.
PATRIC	47227997. VBIMarMed159599_1658.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01601.
Family and domain databases
Gene3D	3.20.20.110. 1 hit. 3.30.70.150. 1 hit.
InterPro	IPR000685. RuBisCO_lsu_C. IPR017443. RuBisCO_lsu_fd_N. [Graphical view]
Pfam	PF00016. RuBisCO_large. 1 hit. [Graphical view]
SUPFAM	SSF51649. RuBisCO_large. 1 hit. SSF54966. RuBisCO_large. 1 hit.
ProtoNet	Search...

Entry information

Entry name

F2JYZ4_MARM1

Accession

Primary (citable) accession number: F2JYZ4

Entry history

Integrated into UniProtKB/TrEMBL:	May 31, 2011
Last sequence update:	May 31, 2011
Last modified:	May 1, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)