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F2JYZ4 (F2JYZ4_MARM1) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length406 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL ADZ90859.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F2JYZ4 [UniParc].

Last modified May 31, 2011. Version 1.
Checksum: DBFFCE2888E596A5

FASTA40644,735
        10         20         30         40         50         60 
MDKFVVTYRV TSHRPLLLVA EKICNDQTTG TFTKIPELSD SGTHCFTAEI RSIDEGFDII 

        70         80         90        100        110        120 
HQEYSGLIRI AFPEDLCGYD LSAIFTIACG GVSSIKIIKT LTIEDISFSP SFIEHFKGPK 

       130        140        150        160        170        180 
FGIAGTLNKL GLTSGPIIGG ILKPNIGITP SDSADLVEQL VSANIDFIKD DEKLQSPPYS 

       190        200        210        220        230        240 
HVKNRIDSIL PIIDKWQQKL GKKVIYAFNI CHSDLGEIER NHEYLVKQGG DAAVINVNQI 

       250        260        270        280        290        300 
GICGLDTLNK YSEVILHAHT NGLAFNERSD WGISFHVWQK VWRLLGIDHL QINGIDGKYW 

       310        320        330        340        350        360 
QDNDSVIEAF RSTVSPLGEL TPTLPVFCSG QWGGQVPETY RCTGQSTDLM YLGGGGIHGH 

       370        380        390        400 
PMGAVGGVKA IRQAWDASLK DQSLEQYALT HPELAQAITF FSQKNK 

« Hide

References

[1]"Complete sequence of Marinomonas mediterranea MMB-1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Lucas-Elio P., Johnston A.W.B., Sanchez-Amat A., Woyke T.
Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002583 Genomic DNA. Translation: ADZ90859.1.
RefSeqYP_004312695.1. NC_015276.1.

3D structure databases

ProteinModelPortalF2JYZ4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADZ90859; ADZ90859; Marme_1595.
GeneID10335669.
KEGGmme:Marme_1595.
PATRIC47227997. VBIMarMed159599_1658.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01601.
OMALAHFCSE.

Enzyme and pathway databases

BioCycMMED717774:GCPW-1645-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF2JYZ4_MARM1
AccessionPrimary (citable) accession number: F2JYZ4
Entry history
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: January 22, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)